Nicotiana tabacum (common tobacco): 107785163
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Entry
107785163 CDS
T04643
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nta01009
]
107785163
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107785163
03041 Spliceosome [BR:
nta03041
]
107785163
Protein phosphatases and associated proteins [BR:
nta01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107785163
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107785163
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107785163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
PHM7_cyt
zf_CCCH_4
Calcipressin
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
107785163
NCBI-ProteinID:
XP_016461886
UniProt:
A0A1S3ZBV1
LinkDB
All DBs
Position
Un
AA seq
953 aa
AA seq
DB search
MELKVSSSKPALLPSDCNSDPEEKEISEEDDDDRNHKHRRRELHSQSEETDAVEPVFSRP
FRKRKPFKNGHPYGEGDSQFSETRFPRRRGMGSFSRAPLESYQRMRLNQSLSGDASNGRG
RGREHSAWAQRDSRFGSADIASQMFPQGPVTPDLFTGRGVQNVSNAQSSSWSAFGMVPGM
SNGGLDTIHSLGFQGTLRPPLNPTVGMGIPRQRCRDFEERGFCLRGDMCPMEHGVNRIVV
EDVQSLSQFNLPVSLPNAHMLGPATVEGSLPVIGPSGSLVSGKALHNKITKPPVIDDGLG
LTDAFVDGSMAGGADFYDPDQPLWSNDRSETSAVLQDLNPSKIDDTGPLLDADSSDHDQV
GQCDAFELEHPLRGAKAASGSQSVWGRIRRSKNNSNVKEITDFTGDASSFDEMGKDLESS
CSNQGNSRPGKQKNVDTIDPQMTESSFKPQSSSGHNMRKPSQKALRTLFVRGIPQKDNKP
DALLSHFQKFGEVIDIHIPQSGERAFIQFSKREEAEAALRAPDAVIGNRFIKLFWANRDS
IMDDGLNGGINLPLTPRGVTSSVVQPHLSVPYKGKDNIQSLASKAAEHGPVVLLPTSGLP
KPVAHNVPKAAPAVQRKVESLELLKEELRKKQELLDQKRNEFRRQLVKLEKQAVGVKAEA
VSDQDLKKQVEGETVSYSAKMQNSSSTELNNDVSSTQADAISDCSRSTENAERSCSISSS
TVATQEPSSLKQSIRPLAPHGAPFIFNRYKLDNRPTAFKVLPPLPCGLANVAVLKEHFSA
FGDLTSVELEDLEPQDSNNGSETLNISAKICYPTRRSAERAFLNGKIWQGQALQFMWLQS
SNSTKDSGVRKDAAPALKQPSDASVQPISKDSSTGSEEGNTAGSDAPEKDYMEREKQPSD
ANVQPIPEDPLTCLQEGNAAGIDEPEKGYIEHATVNEVPNSSSAKQLAECDRS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaagtttcatcttcaaagccagcacttttaccttctgattgcaacagtgat
cctgaagagaaagaaatcagtgaagaggatgatgatgatcgcaatcataagcatcgtagg
agagaactgcattctcaatctgaggagactgatgccgttgaaccagttttcagtagacca
ttcaggaaacgaaagccttttaagaatggacatccttatggtgaaggagattctcagttt
agtgaaaccaggttcccaagaagacgaggaatgggttcattttccagggcccctttggaa
tcataccaaagaatgaggctgaaccaatcactgtctggtgatgctagtaatggtaggggt
cgagggagagaacatagtgcttgggcccaacgtgattcaaggtttggctccgctgatatt
gcatctcaaatgtttccacagggccctgttactcctgatctctttactggaagaggggtg
caaaacgtttctaatgcacagagttcatcttggagtgcatttggaatggttccaggaatg
tctaatggcggccttgatacaattcattcccttggtttccagggaacactcaggccaccc
ttgaatcctactgtgggtatgggtattccaaggcagagatgtagagactttgaggagcgt
ggattttgcctaagaggagatatgtgcccgatggagcatggagtaaatcgtattgttgtt
gaagatgttcagagcctttctcagtttaatcttcctgtgtcacttcctaatgcacacatg
ctaggaccagctactgtagaaggatctttacctgtgataggcccttctggatcattggtt
agtggcaaagctttacacaacaaaattaccaaacctcctgtgattgatgatggattgggt
ttgactgatgcttttgttgatggttctatggctgggggagctgatttttatgatcctgat
cagcctttatggtcaaatgatcgttctgaaacttcagcagtactccaggatttaaatcca
tctaaaattgatgatactgggcctttgttagatgcagactcctctgatcatgatcaagtt
gggcagtgtgatgcctttgaacttgagcatccacttagaggtgctaaggcagcttcagga
tctcagagtgtgtggggaagaatcagaaggtcaaaaaataactcgaatgtgaaagagatc
actgattttacaggggatgcttcaagttttgatgaaatgggaaaagatttggaatcgtcc
tgcagcaatcaaggaaactcccgtccagggaagcaaaaaaatgtagatactattgaccca
caaatgacagaatcatctttcaagccccaaagtagttctggacataatatgagaaaacct
tctcaaaaggcacttcgaacgctgtttgtgagaggcattccacagaaagacaacaaacca
gatgctcttctttcacattttcaaaaatttggggaggtcattgacatccacatcccacag
agtggtgaacgagcttttattcaattttctaagagagaagaagctgaggctgctttaagg
gcacctgatgctgtgatcggcaaccgttttataaagcttttctgggcaaacagggatagc
attatggatgatggtttaaatggtggcattaatttacctttgactcctcgtggagtaaca
tctagtgtggttcaaccccacctatctgttccttataaaggaaaagacaatatccagtcc
ttagcctcaaaagctgctgaacatggtcctgttgttctgttacctacttctggtctacct
aagcctgtggctcataatgttcccaaagctgcaccagctgtgcaaagaaaggtggagagt
ttagaacttttgaaggaagaattgcgcaagaagcaggagctgcttgatcagaagcggaat
gagttccgacgtcagttggttaaacttgagaagcaggctgtaggtgtgaaagctgaagca
gtctcagaccaggatctgaagaaacaggtggagggagaaacagtatcttattctgcaaaa
atgcaaaattcaagctccacagaacttaataatgatgtatcttcaacacaagctgacgca
atctctgattgtagcagatcaacagagaatgcggagcgctcttgttctatatcatcttct
actgtggccacacaggaaccttccagcttgaagcagtcaattcgtccactggcaccacat
ggtgcaccttttatattcaatagatacaaactagacaatcgtcccactgccttcaaagtt
cttccacctttgccatgtggtcttgcaaatgttgctgtcttgaaggaacatttctctgct
tttggtgaccttacctctgttgagctggaagatttggagcctcaagatagtaataatggc
tcagagacgttaaacatatctgctaagatatgttatccaacgcgccggtctgctgagagg
gcatttttgaatggcaaaatctggcaaggccaagctttgcagtttatgtggttgcagtct
agtaattctaccaaggatagtggtgtcagaaaagatgctgctcctgctttgaagcagcct
tcagatgctagtgttcaacccatctcaaaagattcttcgactggttcagaggaaggaaac
acagctgggagtgatgcacctgaaaaagattacatggaacgcgagaagcagccttcagat
gctaatgttcagcccatcccagaagatcctttgacttgtttacaggaaggaaatgctgca
gggattgatgaacctgaaaaaggttatatagaacatgcgactgtgaatgaagttcccaac
tccagttcagcgaaacagttagctgaatgtgatcggtcatga
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