Nicotiana tabacum (common tobacco): 107785213
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Entry
107785213 CDS
T04643
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107785213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107785213
Enzymes [BR:
nta01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107785213
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
HECT type E3
107785213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Arm
Motif
Other DBs
NCBI-GeneID:
107785213
NCBI-ProteinID:
XP_016461945
UniProt:
A0A1S3ZC15
LinkDB
All DBs
Position
Un
AA seq
1541 aa
AA seq
DB search
MGNRGQKRTETVDELPADKRACSSTEFRPSTSNSVVHTTMSSIHESNNGDVDTSSSSSGS
SEGGKDSAYGSCESDNSFRDYYRRQSLDNQGKFKGILSSLSKELSDESALLAALTELCEL
LSFSPDSSISNLMADSFSPILVRLARHESNPDIMLLAIRAMTYLCEGHPRSSAYLVRHDA
VPALCQRLMAIEYLDVAEQCLQALEKISHDQPIVCLQSGAIMAILSYIDFFSTSVQRKAL
STVVNICKKLPSECPSPLMDAVPILCNLLLYEDRQLVESVATCLIRIVEQVCRSSDMLDE
LCKHGLVQQATHLIQLNGRTTVCQSVYVGLIGLLVKLAAGSIVAVRTLFELNISRISKDI
LSTCDFSHGGPSTLTVDGHYNQVDEVLKLLNELLPPISREQNIQLAADKEHFLINHPDLL
QKFGFDLFPVLIQVVSSGVNLYACYSCLSVINKLVYFSKSDMLEFLQNTNISSFLAGVFT
RNDPHVLILALQIVDKLLEKLSHVFLNSFVKEGVLFAVDALLSPEKCSQFLFSDETCQGS
VPCAAVKCLCFASESPTGPEAKTCKIEKETLQNLARHIRTNYFATDSMNPDLGITNVLQK
LKTLSSALTDLVHKASSSIAPLQEKEDLYPVLHQIMSELNGNDAISTFEFIESGVVKSLV
NYLSNGRYLGQKVDGDGSVDQLYIVEKRFELFGRLLLYNSVPPLEDSTFLALIKRLHSAL
SSVENFPVILSHASKLRNSYATVPYGRCTSYPCLKVQFVKGDGESSLGDYTECVVNVDPF
SPLETIEGYLWPKVSRRKSEKLKPPTLATEDESSSRSSQDVSTSQGKSPGPMELDTTSTN
AHETQEVKSNLQLSVEAESMDIEKTKSDSMDISNINAESLEKGKLCSSEDDSSTSLGCTG
CSDDEDVAPKLIFYLEGQQLNQKLTLYQTVLHQQIKAGNDIITNSSMWSQVHRVTYRRCV
RHKPGCAQSCKHVVDSTPSGKPIMWWQYTPFFSSMFSCEMVDLEKSSPTYEILFLLKSLE
GMNRFSFHLMSHIKIYAFAEGKTTDFSDIKVTNSDLPQNEFANSKLTEKLELQMRNPFSV
SIGGMPPWCGQLVNSCPFLFGFEARCKYFRLAAFGQPPIHPEPSSHNTAGGMSGRHQNNG
GLRRKKILVHRNRILDSATQMMDLHADQKVVIEVEYSDEVGTGLGPTLEFFTLVGHEFQK
IGLGMWRGDSMASGTMSVEQESGMLFSSFGLFPRPWSPLSRSLSGLEFSEVLKKFGLLGQ
IVAKALQDGRVLDLPLSKAFYKLVLGRELTVYDIQSFEPELGRALLEFQALVERKRHLES
LSEGKPSLDLELNFGNTKIDDLYLDYTLPGYPDYVFNSASDAKMVDMSNLEEYVSLIVDA
SLNSGISRQIGAFKSGFDQVFPIKHLQVFTEDELERLLCGECGFWNSNELLDHIKFDHGY
TASSPPVVNLLEIMREFDSKQQRAFLQFVTGAPRLPPGGLASLSPKLTIVRKTCSGWVDA
DLPSVMTCANYLKLPPYSSKGKMKEKLLYAITEGQGSFYLS
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgggggcagaaaagaactgaaactgttgatgaactgcctgccgataagcga
gcctgtagctccacggaattcaggccaagtacttctaattcagtggttcatactacaatg
agttctatacacgaaagcaacaatggcgatgtggacacatcatcatcaagttcagggtca
agtgaaggtggaaaggactctgcttacggatcttgtgaatctgataatagcttcagggac
tattacaggcggcaatcgctggacaatcagggcaaattcaaaggaattttgtcaagtttg
agcaaggaattatctgacgaatcagcactgttggctgctcttactgagctatgtgaattg
ttatctttttcccctgatagttcgatttcaaacttaatggcagattcattttctcccatt
cttgtaagattggctagacatgagagcaatcctgatataatgctattagctatcagggca
atgacttatttgtgtgaaggtcatcctcgttcttcggcctacctagttagacatgatgca
gttcctgccctttgtcaaaggttaatggccattgagtacttggatgtggctgaacagtgt
ttgcaagcactggagaaaatttcacatgaccagccgattgtttgtttgcaatctggggct
atcatggccattctaagttatattgatttcttttcgacaagtgtgcagagaaaggcactc
tcaactgtagtaaatatttgtaaaaagcttccctctgaatgtccgtcacctttgatggat
gcagttcccattttgtgtaatcttcttctatacgaggatagacagcttgttgagagtgta
gccacttgcttaattagaatagtggagcaagtatgtcgctcttccgatatgctggatgaa
ctatgtaaacacggtctggttcagcaagccacacatctcatacagttgaatggtcgaaca
acagtttgccaatcagtttacgttggtttaattgggttacttgtcaaactggctgctgga
tctattgtggccgtcaggactctctttgaacttaacatcagccgcatatcaaaggacatt
ttatccacttgtgacttctcacatggggggccttctactctgacggttgatgggcactat
aatcaggtagacgaagttctcaagttgttaaacgaacttcttcctcccatatccagagag
cagaatatccaactagctgcagacaaagaacacttcctcatcaatcaccctgatcttctg
cagaaatttggctttgatttatttcctgtgttaatccaggtggtcagttctggtgtaaat
ttatatgcttgttacagctgtctatctgttatcaataagttagtttatttcagcaaatct
gacatgcttgaatttcttcaaaatactaatatttcaagcttcttagctggagtttttact
cgcaacgatcctcatgttctgatactagcccttcagattgttgataagcttctagagaag
ctctctcatgttttcttgaactcatttgtaaaggaaggtgttctctttgctgttgatgca
cttctttctccggaaaaatgttcgcagtttctattttcagatgaaacctgccaaggatca
gtaccatgtgctgcagtaaaatgtctctgttttgcttctgagtctccaacaggacccgaa
gcaaagacctgcaagatagagaaagagactcttcaaaatcttgctaggcatatcaggacc
aattactttgcaacagactcaatgaatcctgatttaggaataaccaatgttctacagaag
ctgaagactctctcttctgcattaactgatctggtccacaaagctagtagcagcattgct
cctcttcaagagaaagaagacttgtaccctgttttgcatcaaattatgtcagagttaaat
ggaaatgatgccatttccacgtttgagttcattgaaagtggagttgtaaagtctctagtg
aattacctttccaatggccgatacttgggacaaaaggtagatggtgatggttcagtagat
cagctgtacattgtagaaaagagatttgagctgtttggtagattacttttgtataactca
gtccctcctctggaggactccacctttcttgcactgataaagagattgcatagtgcactt
tcctcagtggaaaacttcccagtcatcttgagtcatgcatctaagctacgaaactcgtat
gctactgtcccatatgggcgttgtacttcatatccttgtctgaaggtccagtttgtgaag
ggagacggggagtcttcacttggagattatacagagtgtgttgtgaatgtagatcctttt
tcgcctttggaaacaattgagggatacttgtggccaaaagtgagtagaaggaaaagtgag
aagttgaaacctcccactctggctacggaggatgagtcatcgtctcgttcatcacaagat
gtaagcacgtctcaaggcaaaagtccaggacccatggaattggacaccacatccaccaat
gcccatgaaacgcaggaggtgaagagtaacttacaactatctgttgaagcggaaagtatg
gacatagaaaaaacaaagagcgattcaatggatatttcaaatattaatgcagagtctttg
gagaaaggaaaactttgttcgtctgaagatgatagtagcacaagtttagggtgtactgga
tgttctgatgatgaagatgttgcacctaaattgatattctacttggagggacagcagttg
aaccagaagttaaccctatatcaaactgtactccaccagcagattaaagcagggaatgac
atcattactaattcaagcatgtggagtcaagtacacagggtgacctacagaagatgtgtg
agacataaaccaggatgtgctcagagttgcaaacacgttgtagattctactccatctggg
aaacctataatgtggtggcagtacaccccatttttctctagcatgtttagctgcgaaatg
gttgatcttgagaaatcaagtccaacttatgaaatcttatttcttctgaaaagcttggaa
ggcatgaacaggttcagttttcatctcatgtctcatataaaaatatatgcttttgcagaa
gggaagaccaccgattttagtgatataaaggtcacaaattctgatctccctcagaatgaa
tttgcgaactctaaattgacagagaaactagaactgcaaatgaggaatcctttttctgtt
tccataggtggcatgccaccttggtgtggacagttggttaattcatgcccctttttgttt
ggtttcgaggcaagatgcaagtatttccgcctggctgcatttggtcaaccgccaatccat
cctgaaccgtcatctcataatacggcagggggtatgagcggtaggcatcaaaacaatggt
ggccttcgccggaaaaaaatcttagttcatcgaaatagaattttggattctgcaacacag
atgatggacctccatgccgatcagaaggttgtcattgaggtggaatatagtgatgaggtt
ggtactggtcttggcccaaccttggaattttttaccttggtcggtcatgagttccagaag
attgggctagggatgtggagaggtgatagcatggctagtggaaccatgagtgtagagcag
gaatctggaatgctcttttcttcttttggtctcttccctcgcccatggtcacctttatcc
cgttcgttaagtggcctagagttctctgaagtgctgaaaaagtttgggcttctgggccag
atagttgcaaaggctctccaagatggcagggttttggatcttcctttatccaaagcattt
tacaaacttgttcttgggagggaactcacggtatatgacatccagtcatttgaacccgaa
cttggtagggctctcctagaatttcaggctcttgttgaaagaaaaagacatctggaatca
ctatctgagggaaaaccatcgttagaccttgaacttaatttcgggaatacgaaaattgat
gatctttaccttgactatactcttcctggctatccagattatgtctttaattctgcatcc
gatgcaaaaatggttgacatgtctaacttagaggaatatgtttcactcattgtggatgct
tctttaaattctgggatatcaaggcaaattggagcattcaagtcgggctttgatcaggtt
ttccccatcaaacatcttcaagtattcacagaggatgaattagagcgactgttgtgtgga
gagtgtggattttggaactccaatgagcttctggatcacatcaagtttgatcatgggtac
actgctagcagtcctccagttgtaaatttactcgaaattatgagggagtttgacagcaaa
caacagagagcattcctgcagtttgtgactggtgcacctagactgcctccagggggtctg
gcatctctaagcccaaagttaacaattgttcggaagacttgcagcggttgggttgacgct
gacctgcctagtgtgatgacatgtgccaattatctgaagctaccaccttactcttcaaaa
gggaaaatgaaggaaaaactgttatatgccataactgaaggacagggctcattctacctt
tcatag
DBGET
integrated database retrieval system
