Nicotiana tabacum (common tobacco): 107785349
Help
Entry
107785349 CDS
T04643
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107785349
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107785349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107785349
NCBI-ProteinID:
XP_016462120
UniProt:
A0A1S3ZCE1
LinkDB
All DBs
Position
Un
AA seq
397 aa
AA seq
DB search
MRKMSLLENLPLFFTILFLILNSSIAANAIYNVKNYGAKSNGKIDSSKAFLSAWAAACAS
TSPATIYVPKGSYLLKSAYFQGETCKSKAITLHIDGTILAPSDYNANRNEENWMKFERVT
GVSIYGGTLDGQGASLWACKTSSKNCPQGTMGLTFSNSSNIDISGLTSKNSQMFHILVDN
CDNVKLQGVKVSAPGNSPNTDGIHVQYSSKVTIMNSHIGTGDDCISIGPGTSNLWIENIA
CGPGHGISIGSLGWELEEPGVQNVTVKTVTFSGTQNGLRVKTWARSSNGFVKNVLFQHIV
MANVQNPIIIDQNYCPNNENCPHQGSGVKISNVKYQDIRGTSATEVAVKFDCSKKYPCSG
ISIEDVNLSYRDQPAEASCVNAGGRASGSVKQTSCLG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaatgagtttactagaaaacctcccactttttttcacaatcttgttcttgatc
ttaaactcttccattgctgcaaatgcaatatataatgtcaaaaactatggagcaaaatcc
aatggaaaaatcgattcatccaaagcttttctgagtgcatgggctgcagcatgtgcatct
actagccctgccaccatttacgtgccaaagggaagttacttgcttaaaagtgcatatttt
caaggtgaaacatgcaagagcaaggctattaccttacacattgatggcactatattagct
ccatcggattataatgccaatcggaatgaagaaaattggatgaaatttgaaagagtcact
ggagtttccatatatggtggaaccttagatggacaaggtgctagtctttgggcttgcaaa
acctctagcaagaattgtcctcaaggaacaatgggacttactttttccaactccagcaac
atagatataagcggattaacatcgaaaaacagccaaatgttccacatattggtagataat
tgtgataatgtgaagctacaaggagtaaaggtatcagctccaggaaacagtcccaacacc
gatggtattcacgtccaatattcgtctaaagtcaccattatgaactcccatattggaact
ggagatgattgtatctcaattggccctggaacctccaacttatggattgaaaacattgcc
tgtggccctggccatggaataagcattggaagtttaggctgggaactagaagagcctgga
gttcaaaatgttacagttaaaacagtcacgttcagtggaacacaaaatggattgagagta
aaaacatgggcaagatcaagcaatggcttcgtcaaaaatgttctcttccagcatatagtt
atggctaacgttcaaaaccctatcattatagaccaaaattattgccctaacaatgaaaat
tgccctcatcagggctcgggtgtgaaaatcagcaacgtaaagtatcaggacatacgcggt
acatctgctacggaagttgcagtgaaatttgattgtagcaaaaaatatccatgcagtggc
atatcaatagaagatgtaaatcttagctatagagatcaacccgctgaagcttcttgtgtt
aatgctggaggaagagcttctggttctgtaaaacaaactagttgcttaggttag
DBGET
integrated database retrieval system