KEGG   Nicotiana tabacum (common tobacco): 107785868
Entry
107785868         CDS       T04643                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nta03400]
    107785868
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    107785868
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX DEAD zf-RING_2 zf-C3HC4_2 zf-C3HC4_4 ResIII zf-RING_4 Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 zf-ANAPC11 CUE GIP1_N UBA
Other DBs
NCBI-GeneID: 107785868
NCBI-ProteinID: XP_016462752
UniProt: A0A1S3ZEP9
LinkDB
Position
Un
AA seq 1183 aa
MEMEAKVESENEKKIKMIKSIIGSEITEKAILEALSQQNNNPDAAINHLLDSSRPSAVQK
TVTSTGVRISPMVKQENVEESVGCGTVHGLKVKEEPDVGIDEKGLEVEQKKVVDGYESKG
SVDKCYLSFDGEEIVNGLKVKEEPDMGIEEKGLKVEEKKVLDDYQSKGSVGKWDLSFDEW
LKFPENNPEIDTQKPKEEKKLEIMKVKEEQQDVLCVEPLSARPLSKQEYNSLKNSNVANG
AKQEYNRLKSSSNVAICVNMEKMGIKKNMLSTVVIEDGDFPEDLDWLLVGRTIVTGLSTT
KGRKLENNEIVHFAFPQQGNSKCSSQWGGSRAAAAAAASSIVRFSTKRFGEIGRLPMEWA
KCLIPLVNSSKVKVHGRCVAAPVTLQLMQELMLYVSFYIHQSVFTSGDKSSWKLDSPSQI
DTTTYPLLTLFKLLKVKPFQNAEFTPDELYSRKRQLNLDCDSNEAASALPIAKRRNGCQQ
YSEQNKDEHDISEASFNKLVGSVDMYDLKEMDAPDTLMCCLRPYQKEALYWMSESEKGSD
VEETSKTLHPCWAAYRICEERKVYVNIFSGEATTEFPTASKSARGGILADAMGLGKTVMT
IALILARLDRGSSLDDQEFVSDDADETEYITKRLIDTDTEVSRKAKGGTLIVCPMALLGQ
WKDELEAHSKPGSVSVFVHYGGDRSNDPQVMAEQDVVLTTYGVLSATYKADRENSIFHKV
DWYRVVLDEAHTIKSWKTLGAQAAFTLSAHCRWCLTGTPLQNNLEDLYSLLCFLHVEPWC
NWAWWNKLIQRPYENGDQRALKLIKAILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIQC
IKSEAERDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRSDT
QEFADLDKLARRFLETNPDSTTQKAPTPAYVEEVVEGIRNGENTECPICLESADDPVLTP
CAHRMCRECLLSSWRTPTSGLCPICRQMLRKNELFTCPSENRFRIDVEKNWQESSKVSKL
LECLESIRKTGCGEKSIVFSQWTSFLDLLEIPLKRKKIGYLRFDGKLVQKQRERVLKEFS
ETNEKTILLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKNTVRVRRF
IVKDTVEERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR
NT seq 3552 nt   +upstreamnt  +downstreamnt
atggaaatggaagcaaaggtagaatcagagaacgagaagaaaataaagatgatcaaatca
atcatcggttctgaaattacagaaaaggccattcttgaagccctttctcaacaaaacaat
aatccagatgcagccattaaccacttgctcgattcttcgcggccatcagcggttcaaaag
actgttactagcactggggttaggatttctcctatggtaaaacaagaaaatgttgaagaa
tcagtgggctgtggaacagttcatgggctaaaagttaaagaagaacctgatgtgggtatt
gatgaaaaagggctagaagtggagcaaaagaaggttgttgatggttatgaatcaaaaggg
tctgttgataaatgttatttgagctttgatggtgaagaaatagttaatggactaaaagtt
aaagaagaacctgatatgggtattgaggaaaaagggctaaaagtggaagaaaagaaggtt
cttgatgattatcaatcaaaaggatctgttggtaaatgggatttgagctttgatgaatgg
ttaaagtttcccgaaaacaatccagaaattgatacacagaagccgaaagaagaaaagaaa
ctcgaaatcatgaaagttaaagaagagcaacaagatgtactttgtgttgaaccattgtca
gcaaggcctttatcaaaacaagaatacaattccctgaaaaacagtaatgtggctaatggt
gcaaaacaagaatacaacagactgaaaagtagtagtaatgtggctatttgtgtaaatatg
gaaaaaatgggaattaagaaaaatatgcttagtactgttgtgatagaagatggagatttt
cctgaagatcttgattggttattagttgggaggactattgttactgggctttcaactaca
aaagggagaaaattggaaaacaatgaaattgttcattttgcttttcctcaacaaggaaat
agtaagtgtagttcacaatggggtggatcaagagctgctgctgctgctgctgcatcttcc
attgttagattctcgacgaaaagatttggggagattgggcgtctcccaatggaatgggca
aaatgtctcattccacttgtaaattcttcaaaggtaaaggttcatggccgatgtgttgct
gcgcctgtaactctgcagctaatgcaggagcttatgttgtatgtaagtttctacattcac
cagtcagtgtttactagcggcgataagtcatcttggaagctggattctccctcacaaatt
gataccacaacatatccactacttactttgttcaagttactcaaagtcaaaccatttcaa
aatgctgagttcactccggatgaactttattctcgtaaacgccagcttaatttagattgt
gattcgaatgaggctgcttcagcattaccaatagcaaaacgaagaaacggctgccagcag
tattcagagcaaaacaaggatgagcatgatatctctgaagcatcgtttaacaaacttgtt
ggttctgtagacatgtatgacttgaaggaaatggatgctcccgatacacttatgtgctgc
ctaaggccttaccagaaggaggctctttactggatgtcagaatcagagaaaggaagtgat
gttgaggaaacatctaaaactcttcatccatgttgggcagcatatcggatatgtgaagag
aggaaagtttatgttaacattttctctggggaagcaacgacagaattcccaactgcatca
aaatcagcacgaggagggatattggcagatgcaatggggcttggaaaaacagtgatgaca
attgctttaattcttgctagactggacaggggtagtagccttgatgatcaagaatttgtc
tcagacgacgcagatgaaactgaatatataacgaaaagactcattgatactgatacagaa
gtctcaagaaaggcaaaaggtggcactctcattgtctgtcccatggcattgctaggccag
tggaaggatgaacttgaagcacattcaaaacctggtagcgtttcagttttcgttcattat
ggtggggacagaagtaatgaccctcaagtgatggcagaacaagatgtagtcctaacaact
tatggtgtcttgagtgcaacttacaaggctgatagggagaatagcatatttcataaagtt
gattggtaccgcgttgttctggatgaggcacacaccataaaatcttggaagactctaggt
gcacaggccgcgtttactttgtcagcgcattgtaggtggtgtcttactggtactcctctt
cagaataatttggaggacctttacagccttttatgtttcttgcacgttgagccatggtgc
aactgggcatggtggaacaagttaatacagcgaccttatgaaaatggtgatcaaagagct
ttaaaattgatcaaagccattttaaggccattaatgttgagaagaacaaaggataccaag
gacaaagaaggaaggccgattcttgttctccctccaactgatattcaagtcattcagtgt
ataaaatcagaagccgaacgtgacttctatgatgccctcttcaagagatctaaagttcaa
tttgatcagtttgtggcacaaggaaaagttcttcacaactatgctaatattctcgaatta
ctacttcgattgaggcagtgttgcaatcatcctttccttgttatgagtcgaagcgataca
caagaatttgcagacttagacaagctagcaagaagattcttggaaacaaatcctgattct
acaacacagaaagcacctacaccagcatatgtagaagaagttgttgagggaattcgtaac
ggcgaaaatacagaatgtccaatatgccttgagtcagcagatgatcctgtgttaacacca
tgtgctcacagaatgtgcagagaatgtctactttcaagttggagaactccaacaagtgga
ctttgtccaatttgtagacaaatgctaaggaaaaatgagctatttacatgtccatccgaa
aatcggtttaggattgatgttgagaagaattggcaagagtcttctaaggtttcaaaactg
ttggaatgtttagaatcaataagaaaaacaggctgtggtgaaaagagtattgtttttagt
caatggacttcatttcttgatcttttggagattccacttaagagaaagaaaattggttat
ttgaggtttgatgggaagttggtgcaaaaacaaagagaaagggtcttgaaagagttcagt
gagactaatgagaaaacaattttgttaatgtcactaaaagctggaggtgtgggcttgaac
ttaacagcagcttctaatgtcttcctcatggatccatggtggaatcctgcagtagaggag
caagcaataatgagaattcatcgtattggtcaaaagaatacagttcgtgttagaaggttc
attgttaaggacacagtagaagaaagaatgcaacaagtacaagcaagaaagcaaaggatg
atagctggagctttgactgatgaagaagtacgttcggctagacttgaagaactcaaaatg
ctttttcgatag

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