Nicotiana tabacum (common tobacco): 107786331
Help
Entry
107786331 CDS
T04643
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nta01009
]
107786331
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107786331
03041 Spliceosome [BR:
nta03041
]
107786331
Protein phosphatases and associated proteins [BR:
nta01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107786331
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107786331
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107786331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Nup35_RRM
PHM7_cyt
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
107786331
NCBI-ProteinID:
XP_016463276
UniProt:
A0A1S3ZG56
LinkDB
All DBs
Position
Un
AA seq
941 aa
AA seq
DB search
MELKVSSSKPTLLPSDCNSDPEEKEISEEDDDDRNHKHRRRELHSQSDETDAVEPVFSRP
FRKRKPFENGHPYGGGDSQFSETRFPRRRGMGSFSRAPLDSYQRMRLNQSLSGEASNGRG
RGREHSAWAQRDSRFGSADIASHLFPQGPVTPGLFTGRGVQNVSNAQSSSWSAFGMVLGM
SNGGLDTIHSLGFQGTLRPPLNPTVGMGLPRQRCRDFEERGFCLRGDMCPMEHGVNRIVV
EDVQSLSQFNLPVSLPNAHMLGPATAQGSLPVIGPYGSLVSGKALHNKSTKPPVIDDGLG
LTDAFVDGSMAGGADFYDPDQPLWSNDRSETSAVLQDLNPSKIDDTGPLLDADSSDHDQV
GQCDAFELEHPLKGATAASGSQSVWERIRRSKNKSNVKEITDFTGDASSYDETGKDLELS
CSNQGNSHPGKQKMTESSFKPQSSSGHNMRKPSQKALRTLFVRGIPQKDNKPDALLSHFQ
KFGEVIDIHIPQSGERAFIQFSKREEAEAALRAPDAVMGNRFIKLFWANRDRIMDHGLNG
GINLPLTPRGVTSSVVQPHLSVPYKGKDNIQSLASKAAEQVPAVLLPSSGLPKPVAHNVP
KAAPVVQKKVESLELLKEELRKKQELLDQKRNEFRRQLVKLEKQAVGVKAEAVSDQDLKK
QEGEPVSYSAKVESSSSAELNNDVSSTQADAISDCSRSTENAERSCSISSSTVATQEPSS
LKQSIRPLAPHGAPFVFNRYKIDNRPTAFKVLPPLPCGLANVAVLKEHFSAFGDVTSVEL
EDLEPQDSSNGSETLSISARICFPTRRSAERAFLNGKIWQGQALQFMWLQSSNSTKDSGV
RNDAAPALKQPSDASAQPISKDSTGSEEGNTAGTDAPEKGYMEREKQPADANVQPIPEDP
LTGLQEGNAAGIDEPEKGYIEHVTVNEVPNSSSASTSVDRS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaagtttcatcttcaaagccaacacttttaccttctgattgcaacagtgat
cctgaagagaaagaaatcagtgaagaggatgatgatgatcgcaatcataagcatcgtagg
agagaactacattctcaatctgatgagactgatgccgttgaaccagttttcagtagacca
ttcagaaaacgaaagccttttgagaatggacatccttatggtggaggagattctcagttt
agtgaaaccaggttcccaagaagacgaggaatgggttcattttccagggcccctttggac
tcataccaaagaatgaggctgaaccaatcactgtctggtgaagctagtaatggtaggggt
cgagggagagaacatagtgcttgggcccaacgtgattcaaggtttggctcggctgatatt
gcatctcacctgtttccacagggccctgttactcctggtctctttactggaagaggggtg
caaaacgtttctaatgcacagagttcatcttggagtgcatttggaatggttctaggaatg
tctaatggcggccttgatacaattcattccctcggtttccagggaacactcaggccaccc
ttgaatcctactgtgggtatgggtcttccaaggcagcgatgtagagactttgaggagcgt
ggattttgcctaagaggagatatgtgcccgatggagcatggagtaaatcgtattgttgtt
gaagatgttcagagcctttctcagtttaatcttccagtgtcacttcctaatgcacacatg
ctaggaccagctactgcacaaggatctttacctgtgataggcccttatggatcattggtt
agtggcaaagctttacataacaaaagtaccaaacctcctgtgattgatgatggattgggt
ttgactgatgcttttgttgatggttctatggccgggggagctgatttttatgatcctgat
cagcctttatggtcaaatgatcgttctgaaacttcagcagtactccaggatttaaatcca
tctaaaattgatgatactgggcctttgttagatgcagactcctctgatcatgatcaagtt
gggcagtgtgatgcctttgaacttgagcatccacttaaaggtgctacggcagcttcagga
tctcagagtgtgtgggaaagaatcagaaggtcaaaaaataagtcgaatgtgaaagagatc
actgattttacaggcgatgcttcaagttatgatgaaacgggaaaagatttggaattatcc
tgcagcaatcaaggaaactcccatccagggaagcaaaaaatgacagaatcatctttcaag
ccccaaagtagttctggacataatatgagaaaaccttctcaaaaggcacttcgtactctg
tttgtgagaggcattccacagaaagacaacaaaccagatgctcttctttcacattttcaa
aaatttggggaggtcattgacatccacatcccacagagtggtgaacgagcttttattcaa
ttttctaagagagaagaagctgaggctgctttaagggcacctgatgctgtgatgggcaac
cgttttataaagcttttctgggcaaacagggatagaattatggatcatggtttaaatggt
ggcattaatttacctttgactcctcgtggagtaacatccagtgtggttcaaccccaccta
tctgttccttataaaggaaaagacaatatccagtccttggcctcaaaagctgctgaacag
gttcctgctgttctgttaccttcttctggtctacctaagcctgtggctcataatgttccc
aaagctgcaccagtggtgcaaaaaaaggtggagagtttagaacttttgaaggaagaattg
cgcaagaagcaggagctgcttgatcagaagcggaatgagttccgacgtcagttggttaaa
ctggagaagcaggctgtaggtgtgaaagctgaagcagtctcagaccaggatctgaagaaa
caggagggagaaccagtatcttattctgcaaaagtggaaagttcaagctcagcggaactt
aataatgatgtatcttcaacacaagctgacgcaatctctgattgtagcagatcaacagag
aatgcggagcgctcttgttctatatcatcttctactgtggccacacaggaaccttccagc
ttgaagcagtcaattcgtccactggcaccacatggtgcaccttttgtattcaatagatac
aaaatagacaatcgtcccactgccttcaaagtccttccacctttgccatgtggtcttgca
aatgttgctgtcttgaaggaacatttctctgcttttggtgacgttacctctgttgagctg
gaagatttggagcctcaagatagtagtaatggctcagagacgttaagcatatctgctagg
atatgttttccaacgcgccggtctgctgagagggcatttttgaatggcaaaatctggcaa
ggccaagctttgcagtttatgtggttgcagtctagtaattctaccaaggatagtggtgtc
agaaatgatgctgctcctgctttgaagcagccttcagatgctagtgctcaacccatctca
aaagattcgactggttcagaggaaggaaacactgcagggactgatgcacctgaaaaaggt
tacatggagcgcgagaagcagcctgcagatgctaatgttcagcccatcccagaagatcct
ttgactggtttacaggaaggaaatgctgcagggattgatgaacctgaaaaaggttatata
gaacatgtgactgtgaatgaagttcccaactccagttcagcctctacttctgttgatcgg
tcatga
DBGET
integrated database retrieval system
