Nicotiana tabacum (common tobacco): 107786866
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Entry
107786866 CDS
T04643
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107786866
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107786866
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
107786866
NCBI-ProteinID:
XP_016463851
UniProt:
A0A1S3ZHQ4
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Position
Un
AA seq
437 aa
AA seq
DB search
MATALYFLCPLLIMMMLFITATASKSIEEEKQFQSLRNSTMVNRLSENDELRHEHAEVDP
EAIASMVAMSIRNSTERRKLGYFSCTTGNPIDDCWRCDRHWVRNRKRLADCSIGFGRNAI
GGRDGRYYVVTDSGDDDPINPRPGTLRHAVIQDEPLWIVFKHDMVITLKQELMMNSFKTI
DARGVNVQIAYGACITIQFVTNIIIHGLHIHDCKPTGNAMVRNSPSHYGWRTMADGDGIS
IFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVILLGHSDSYIRDKVMQ
VTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYLAPVNP
FAKEVTKRVEPWEGSWKHWNWRSEGDLMLNGAYFTASGRAAPRSYARASSLAAKSSSMVG
TITSNAGALSCHIGFQC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgctctgtattttctttgtccattgctaattatgatgatgcttttcatcact
gccacagccagtaaaagtattgaagaagaaaagcaatttcagagcttaaggaactcgact
atggtgaacaggttaagtgaaaatgatgaactcaggcatgaacatgctgaagttgatcca
gaagctattgcttctatggttgctatgagcattaggaatagcacagagaggaggaaatta
ggctacttctcatgtacaacaggaaatccaatagatgattgttggcgttgtgatcgccat
tgggtacgtaaccgcaaacgcttagctgactgttctattggctttggacgcaatgccatt
ggtggtcgtgatggcaggtattatgttgtgactgactcaggtgatgacgatccaataaat
ccccgacctggaacacttcgtcatgcagtaattcaagacgaaccattatggatagtgttt
aaacatgatatggtcatcacacttaagcaagaacttatgatgaacagtttcaagacaatt
gatgctcgtggtgtgaatgtacaaattgcatatggggcttgtattactatccaatttgtt
acgaatatcatcattcacggccttcatattcatgactgtaaacccactggtaatgccatg
gttcgaaactcaccatcacactatggttggaggacaatggctgatggcgatggcatttcc
attttcggttcgagtcatatttggattgaccacaattctctttctaattgtgctgatggt
ctcattgatgctatcatgggttcaactgcaattaccatttcaaacaattacttcacccac
cacaatgaggtgattttattggggcacagcgactcctatatcagagataaggttatgcag
gtgactattgccttcaaccattttggtgagggtctgatccagagaatgccaagatgtagg
catggttatttccatgtggtgaacaatgactatacacactgggagatgtatgcaattggt
ggtagcgctgatcctacaattaacagccagggcaacagataccttgccccagtgaaccct
tttgccaaagaggtgacgaaaagagtggaaccatgggaaggatcatggaagcactggaac
tggagatcagagggagaccttatgctgaatggagcatactttactgcgtctggacgcgcc
gctccacgtagttatgcaagagcctcaagcttagctgctaaatcctcttctatggtggga
actattacatcaaatgctggtgcactttcttgtcacattggcttccaatgttga
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