Nicotiana tabacum (common tobacco): 107787198
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Entry
107787198 CDS
T04643
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107787198
03015 mRNA surveillance pathway
107787198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107787198
03041 Spliceosome [BR:
nta03041
]
107787198
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107787198
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
107787198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
107787198
NCBI-ProteinID:
XP_016464221
UniProt:
A0A1S3ZIP2
LinkDB
All DBs
Position
Un
AA seq
873 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKMDVMKPWIAKRVTELI
GFEDEVLINFIYGLLERKVVNGKEVQISLTGFMERNTGKFMKELWALLLSAQNNASGVPQ
QFLEAKEEEMRKKKAETDRIANEIQKKKERESRELDQEKRKMMDDYASNSRQKNAALEPS
PKHQPRVRSTDDLDHVDRNGSRRIHRVSRSPRSAHHSPSPRRSRSISKSFSNSRSYSGER
RRSRSTSGSPLERRGRSLSSERVYRSPPRRSVSPRRKHSPQQSLSPPRHRQRSTSRVRQG
SPSVARYRRRSPFRRRRSPIRCRSRSPIQRRSRSPIRRRSRSPMWRRSRSPSRRSPVRYR
SRSSIRCRSPLRRRTPNPTKRRSPSPVGRGYHRSPLSPRSSLSPAQRKSFISGRKRSLTS
ARRSISPQGSLSPSPIYHKFPSPIRKRILKNESSPVQSPRGRIRSREKYSPIRHAPPVKT
EAHKGSRSLERRRPISSRSPQRDIYDLKDSRKKESLLPPRRRRSPSVSESPRSRSASESL
PTKRERSPSENRGPRSTLNQRERKTIDTDSPNPRKLREHRVSSNISEKIADEKEMNHSRE
AFEHKPRSSRKIPTTPDPNKDLGKGRDEEEFSEFHSHSDRLESRKRNEVMKSEKFSAMME
QTKELDQQKSPSIHRHSHSVKRERESYAGESFKAEKENLSHANYIKGKELLESETPLTSS
RKAEQNDQSGDDGSGSEESEKRRAKVKEKRKHKRSGKYESSSDDSYDSDVEGRKEAKRRR
KEERRWKKEEKRRRREERQRRKEERHAQKLKLKSANAMSSPSDTERNPDCHASYDEHLRK
GDVEESESVQKRLEIELREKALESLRAKKGISH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggtttttccggggcacgtcggccgagcaggacactcggttctctaataag
caagccaagctgttgaaatctcagaagttcgctcctgaattggaacatctggtggacatg
accaaggtgaagatggatgtaatgaaaccatggattgccaaacgagttaccgagcttatt
ggttttgaagatgaagttcttatcaatttcatttatggccttcttgaacgaaaggtagtt
aacggcaaggaggttcaaatttcacttactggattcatggaaagaaacactggcaaattt
atgaaagagctttgggcgctactacttagtgcacagaacaatgcaagcggtgttcctcag
cagttcctagaagccaaagaagaggaaatgagaaagaagaaggctgagactgatcgaatt
gccaatgagattcagaagaaaaaggagagagagagtagggagctggatcaagagaaaagg
aagatgatggacgattatgccagcaattcgagacaaaaaaatgctgcactggagccaagt
ccgaaacaccagcctcgggtgcgctcgacagatgatttagaccatgttgacagaaatggc
tcaagaagaatacacagggtctctagatccccacgttcagcacatcattcaccctccccg
aggagatcaaggtcaatcagcaagtcattttctaattcaaggagttattctggtgaaagg
cgcaggtcacgaagtacatccggatctcctttagaacggagaggtcgctcactttcatct
gaaagggtataccgctctccaccaaggcgctctgtttcacctcgtaggaagcattcacct
caacaatctctctctccaccaagacacaggcaaagatcaacctcccgagtacgtcaaggg
tcaccttctgttgcgcggtatcgaagacgttctccattccgacgtaggaggtctcccatt
cgatgtagatcgaggtctcccattcaacgtagatcgagatctccgattaggcgtagatca
cgatcccctatgtggcgtaggtcacggtctccaagtagacgctcaccagtgcgatataga
tcaaggtcatctattagatgtcgatcaccacttcggcgcagaacaccgaatcccacaaaa
cgtaggtccccttctccggtgggtcggggttaccaccgatctccattgagtcctcgaagt
tctctatctccagctcaacgaaaatccttcatatctggcaggaaaagatccttaacatct
gccagaaggtctatttcacctcaaggatcactttctccctcacccatttaccacaagttt
ccttcaccaatcagaaagagaatattgaagaatgaaagttcaccagttcaatctcctcgg
ggaaggataaggagccgtgaaaaatactcccctattcgacatgcccctccagtaaaaact
gaggcgcataaaggatccagatcattggaacgtagacgtcctatttcttctaggtcacca
cagagggacatatatgaccttaaggattcacgaaaaaaagagtcgcttttgcctcctcgg
cgacggcggtcaccatctgtttcagaatctccacgctccagatcggcctcagaatctcta
ccaacaaaaagggaaaggagtcctagtgaaaatagagggccaaggagtactttgaaccag
agggagagaaagacaattgacactgacagcccaaatcccaggaaattgagagagcacaga
gttagttctaacatttctgagaaaattgcagatgagaaagaaatgaaccattcaagggag
gcctttgagcataaacctaggtcttcaagaaaaattcctacaacacctgatccaaataaa
gatcttggaaaggggcgggatgaggaagaattttctgaatttcatagccattcagatcgc
ttggagtcaagaaagcgaaatgaagtgatgaagagtgaaaaattttccgcaatgatggag
caaacaaaggagctggatcaacaaaagtcaccatcaatccatagacactctcattcagtt
aagagggaaagggaatcatatgccggggagagcttcaaagcagagaaggaaaacctgtct
catgcaaactatatcaagggcaaagagctacttgagtcagaaactcccctcacttcatca
aggaaagctgagcagaatgatcaaagtggtgatgatggttctggttctgaggaaagtgaa
aagcgtagagctaaagttaaggaaaaaagaaagcataagaggtctggcaaatacgagtca
tcgtcagatgatagttatgactctgatgttgagggtaggaaggaggctaaaaggaggagg
aaagaggagaggagatggaagaaagaggagaagcgtaggcggcgggaggagagacagcgc
agaaaggaagaaaggcatgcccagaaactaaaattgaagtcagctaatgccatgtcttcg
ccatcagatacagagagaaatcctgattgccatgcttcttatgatgagcatctgaggaag
ggggatgtcgaggagtcagagtccgtgcagaaaaggcttgagattgagctgcgggagaag
gctcttgaatctctcagagcaaaaaagggcatcagccattaa
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