Nicotiana tabacum (common tobacco): 107787487
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Entry
107787487 CDS
T04643
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107787487
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107787487
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
RRM_10
DUF8400
Motif
Other DBs
NCBI-GeneID:
107787487
NCBI-ProteinID:
XP_016464558
UniProt:
A0A1S3ZJZ7
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All DBs
Position
17:complement(96907680..96913995)
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AA seq
469 aa
AA seq
DB search
MSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLL
PEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLLQPVVGPDGKKKEP
ESNVLFASLENMQYAVTIDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTTAAAAKD
ALEGHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQQASAVHATPPVW
HNPQSGPQSFGYAAAAAVPGQASTSQMSSWNPNLQGGGSTFPSTPTRFPGQSYASPVSAY
ATAVNPPGSSQQTNHIVSSGRSYSVSQPPHPSTMPPGGVPPPGHAPYHG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatccgggcaacagcagtttcggtacacacagacgccgtcgaaagttcttcac
ctccggaatttgccatgggattgcagcgatgaagagcttgtagagctttgcaagcccttt
ggtaaaattgtcaacaccaagtgcaacgtcggggccaaccgcaaccaagcctttgtcgaa
ttcgcagaccttaatcaggcaatcaatatggtttcatattatgcctcgtcttcagagcct
gctcaagttcgtggcaagactgtatacatccagtattctaacaggaatgagattgtcaat
aataagagtcccggagatgttccaggaaatgttttgctggtaactattgagggtgttgaa
gctggtgatgtcagcatcgatgtgattcatttggtgttttcagcctttggttttgtgcaa
aagattgctacttttgaaaaggcagcaggttttcaggcattgattcaatttagtgatgtt
gggacagcatctgctgctagagaggcactggatgggagaagtataccaaagtacctgctt
ccggaacatgttaatcattgtcacttgcgcatctcatactctgcacacacggaccttaat
atcaaatttcaatctcatcggagcagggactatacaaacccttatctcccagtaaatcct
actgcaatggaggggcttcttcagcctgttgtaggtccagatggaaagaaaaaggaaccc
gagagtaatgtgctttttgcctctctagaaaatatgcagtatgctgttactattgatgtc
cttcacacggtattctctgcatttggcactgtccaaaagattgctatatttgagaagaat
ggtcaaacccaggcattaattcagtatcctgatgtaacaactgcagctgctgcaaaggac
gctttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctgaatgtacaggcatacagtgacaaaagtagagattacacagttcca
gaatcaagtttgcttgcaatgcaacaagcatcagcggtccatgccacacctccagtttgg
cataaccctcagtctggtccacagtcatttggctatgctgctgccgctgctgttcctggc
caagcatctacatcccaaatgtcctcatggaatccaaatttgcagggtggcggatcaacc
tttccatctactcctaccagatttcctgggcaatcatatgcttcaccggtttctgcttat
gcaacagcagtaaatcctcctggatcgtcacagcagaccaatcacattgttagtagtggt
cgatcttatagtgtaagtcagcctcctcatccatcaaccatgccgcctggaggtgttcca
cctcctggtcatgcaccttatcacggttaa
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