KEGG   Nicotiana tabacum (common tobacco): 107788077
Entry
107788077         CDS       T04643                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03020  RNA polymerase
nta03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107788077
  09124 Replication and repair
   03420 Nucleotide excision repair
    107788077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    107788077
   03400 DNA repair and recombination proteins [BR:nta03400]
    107788077
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     107788077
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107788077
SSDB
Motif
Pfam: RNA_pol_Rpb4 TRF IL5
Other DBs
NCBI-GeneID: 107788077
NCBI-ProteinID: XP_016465212
UniProt: A0A1S3ZLI2
LinkDB
Position
Un
AA seq 138 aa
MSLDEEENAAELKIGDEFLKAKCLMNSEVSLILEHKYEQIQQMSDDPSNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRTLD
EEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctttggatgaagaagaaaatgcagccgaactcaaaattggcgacgagtttttgaag
gccaagtgtctaatgaactctgaagtttctttgattcttgaacacaagtatgagcagatt
cagcagatgtctgatgatccgagcaatcaagtttcccaagtgtttgagaagtcactgcag
tatgtgaagcgtttcagccggtacaagaatcctgatgctgttagacaagttcgagaaatc
cttagcagatatcaacttgctgaattcgagctctgcgtcctggggaatctttgtccagaa
actgttgaggaagctattgccatggtcccatctataaagaatagaggtcgcacgcttgat
gaggaggcaatcgagaaaatgctgaatgatctatccctgataaagaagtttgagtag

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