Nicotiana tabacum (common tobacco): 107788135
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Entry
107788135 CDS
T04643
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107788135
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107788135
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
107788135
NCBI-ProteinID:
XP_016465280
UniProt:
A0A1S3ZL61
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Position
Un
AA seq
400 aa
AA seq
DB search
MVSLASATFGVCLFVFLSIANAQYYNSPLKFFNVLDYGAVADEKRDNSQAFLKAWEDACQ
WRGRSMVLIPYGTYMLRSVSFEGPCRSLMRFVIKGVLKAPTSPSLFNTNTWIGFRYINGL
VVKGGGYLDGQGASAWPYNDCSKNPHCMPLPVTLRFDFVTNSRIHHLRSINSKNSHINLF
ACNNINISFVRMTAPGDSPNTDGIHIGDSTNIRISRTVIQTGDDCISMVTGSRNIDISDV
TCGPGHGISIGSLGKSPGEFVTGINVRNCTFIGTQNGARIKTWAPSLSSEASDIFFGDIY
MQNVNNPVLIDQQYCPYPSCSNLGQDNSKVQISNVTFSNIWGTSSSKVAISLKCSKLVPC
KNVQLNNINLAYHGRGGPATSSCLNVIGASYGKQSPPSCL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattggcttctgcaacttttggtgtgtgcttgtttgtattcttgagcatagct
aatgcccaatattataattcaccacttaagttcttcaatgttttggattatggtgcagtt
gctgatgagaagagagataatagtcaggcatttttaaaggcatgggaagatgcttgtcaa
tggagaggaaggagtatggttttaattccatatggaacttacatgttgaggtcagtttca
tttgagggtccatgcaggagtttaatgagatttgtaataaaaggggttctcaaagctccc
acaagtccatcattgttcaacacaaacacatggattggttttcgttacataaatgggcta
gttgttaaaggtggtggctatttggatggccaaggtgcttctgcttggccatataacgat
tgttccaagaacccccattgcatgcctcttcctgtgactttgagattcgatttcgtgacg
aattcaagaatccatcatttgagatcaatcaacagcaagaactcccacataaacctcttt
gcttgcaacaacataaacatcagtttcgtccgaatgacagcccctggggacagccccaac
accgacggcattcacatcggagattccaccaacatcagaatttcaagaactgtcattcag
accggcgatgactgcatttccatggttacaggcagccgaaacatcgacatctccgatgtt
acttgtggacctggtcatggaattagcattggtagtctaggaaaatcccctggagaattt
gttacaggcataaatgtgagaaattgcacatttatcggaactcaaaatggggctaggatc
aaaacttgggctccctctttgtcaagtgaggcttctgatatattttttggtgacatttac
atgcaaaatgtcaataatccagtcctcattgatcaacaatactgcccatatccttcttgc
agcaatctgggacaggacaattctaaagtacagataagcaatgtgacattcagtaacata
tggggaacatcaagttcaaaggttgcaatctctttaaaatgtagtaaactggtgccctgt
aagaatgtgcagcttaacaatatcaacttggcataccacggacgaggaggaccagccacg
tcttcgtgtttaaatgtgattggtgcttcatatgggaaacaatctcctcctagttgttta
tga
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