Nicotiana tabacum (common tobacco): 107788296
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Entry
107788296 CDS
T04643
Name
(RefSeq) DNA mismatch repair protein MSH4-like isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107788296
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107788296
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
107788296
NCBI-ProteinID:
XP_075109387
UniProt:
A0AC58UIQ7
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Position
5:5227528..5246695
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AA seq
795 aa
AA seq
DB search
MEDDTGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYEPM
AIIVPPNKLAADGMVGVSQLADGFCSSTRKVIMNRGCFDDTRGAVLVKGLAAKEPSALGL
DSYYKQYYLCLAAAAATIKWIEAEKGVIVVNHSLLVTFNGSFDHMNIDATSVQNLEIIEP
MHSSLLGTNSKKRSLFHMLKTTRTIGGTRLLRANLLQPLKDIETINTRLNCLDELMSNEQ
LFFGLSQALRKFPKETDRVLCHFCFKPKRVTNEVLASDNGRRNQIMISSIILLKTALDAL
PLLSQVLKEAKSCLLGNVYKSICENEKYTSIRNRIGEVIDEDVLHTRVPFVARTQQCFAL
KAGVDGLLDMARRSFCDTSEAIYDLANKYREDFRLPNLKIPFNNRKGFYFSIPQKDIQGK
LPSKFIQVMKHGNNVHCSSLELASLNARNKSAAKECWLRTALCLEALMDAIREDVSVLTI
LSEVLCLLDMMVNSFAHTISTKPVGRYTRPNFTCDGPLAIDSGRHPILESINNDLIPNGI
FLSEASNMAIVMGPNMSGKSTYLQQVCLTVILAQIGCYIPARFATLRVVDRIFTRMGTMD
SLESNSSTFMTEMKETAFIMQNVSPRSLIVMDELGRATSSSDGFAVAWSCCEQLLALKAY
SIFATHMENLSELATMYPNVKILHFDVDVRNNRMDFKFLLKDGLRHVPHYGLMLAGVAGL
PSSVVETAKRITSRIKEKEMKRMEVNYRQYQDIQLTYQVAQRLMCLKFSDQDEDSLRDAL
QDLKESYLSGRHKDN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacaccggagaacgatcaagcttcgtcatcggcctcatcgagaatcgcgcc
aaggaggttggagtagctgcatttgacttgcgatcagcttcactgcatctttctcagtat
atagagactagcagctcctatcaaaatacaaagactttactacagttctatgaacctatg
gcgatcattgttcctccaaataaactggcagcagatggaatggtcggagtctcacagcta
gctgatggattttgttcctccacaagaaaggttataatgaatcgtggttgctttgatgat
accaggggagctgtactggttaaaggattagctgctaaggaaccgtctgctcttggtttg
gactcatactacaagcaatattatttgtgtctggctgcagcagcggcaactatcaagtgg
attgaagcagagaaaggtgttattgtggtaaatcactctttgctggttaccttcaatgga
tcttttgaccacatgaacattgatgccaccagtgttcagaacttggagataattgagcct
atgcactcttctcttttgggcacaaacagcaaaaagagaagtttattccacatgcttaaa
acaactcgaactattggcgggactagacttctgagggcaaatcttttgcagcctctgaaa
gacatagagaccattaacactcgactcaattgcctggatgagttgatgagcaatgagcag
ctattctttggcttgtctcaggcccttcgtaagtttccgaaagaaacagatagggtcctt
tgtcacttctgcttcaagccaaagagagttactaatgaagtcttggcttcagataatgga
aggaggaaccaaattatgatatccagcattattcttctcaaaaccgctcttgatgcttta
ccgttactctcccaggtgcttaaagaagccaagagttgtctgctgggaaatgtttacaag
tccatatgtgagaatgaaaaatatacttcaatcaggaacagaattggagaagtgattgat
gaagatgtccttcatacacgagttccttttgttgcacggacacagcagtgttttgctctt
aaggctggagttgatgggcttcttgatatggcccgtagatcattttgtgacaccagcgaa
gctatatacgacctagcaaataagtatcgtgaagatttcagactgccaaacttgaagatc
ccattcaataacaggaaagggttttactttagcattccgcaaaaggacatacagggaaaa
ctacccagcaagttcatccaggtcatgaaacatggaaacaatgtccattgctccagtctt
gaacttgcttcattgaatgcgaggaacaagtctgcagctaaagaatgctggttgaggact
gcactctgcctggaagcactaatggatgcaatacgagaggatgtctctgtgctgaccatt
ctttcagaagtgctgtgccttttagacatgatggtgaattcatttgctcacacgatatca
acgaaaccagttggtagatatactagacctaattttacatgtgatggcccattggcaatt
gattctggacggcaccccattctggaaagcataaacaatgatttgattccaaatggtatc
tttctttctgaagcatcaaatatggctattgtaatgggcccaaacatgagtggaaaaagt
acttatcttcagcaagtttgtttaactgtcatccttgctcaaattggttgctatattcct
gctcggtttgccactttgagagtggtcgatcgtatttttacaaggatgggaacaatggac
agtctcgaatcaaactctagcacgttcatgacagagatgaaggagacggcttttataatg
caaaatgtctctcctagaagtctgatcgtaatggatgaattggggagggcgacttcgtcc
tctgatggatttgcagtcgcatggagctgttgtgagcagctattggcacttaaagcgtac
tcaatatttgctactcatatggaaaatctttcagagctagccaccatgtatccgaatgtg
aaaattcttcattttgatgttgatgtgaggaataaccgcatggacttcaagtttctattg
aaggatggactgcgtcacgtgccacattacggccttatgttagcaggggtagctggacta
ccaagttcagtagtagaaactgccaaaagaatcacatctaggattaaagagaaggaaatg
aagagaatggaggtgaattacagacagtatcaggacatacaattgacttaccaagtggct
caacggctgatgtgcttgaaattttctgatcaggatgaagattctttgagggatgctctg
caggacctcaaagaaagctacttaagtggtaggcataaagataactag
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