Nicotiana tabacum (common tobacco): 107788851
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Entry
107788851 CDS
T04643
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107788851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107788851
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107788851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
MMR_HSR1
GTP_EFTU_D4
zf-Sec23_Sec24
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
107788851
NCBI-ProteinID:
XP_016466066
UniProt:
A0A1S3ZNV7
LinkDB
All DBs
Position
Un
AA seq
726 aa
AA seq
DB search
MPRKVNYGVNYEEDFDDYEDYGYDCDDGCGYAEEDGTPPETRSKQELDNAGVWRCPICTF
DNEDTMNACDICGVLRHPLVKNCAGSKENAVGGICKDSGASVMAKSLFASLLLQKPKKAV
NFEAQNYSFKTEDCFNLYKPGNMCGHFHDLHTAFCSQSHCKIDIVPFKFDPQSPDDSVLS
GIIPSRLRPKADTDKVLQLNVPSNNKQLSTEVKKDLAAEGHPSSYTSLAKDDLKDSDSSS
KTRGNDGVTSNLNDMSISSKPRSVDTRKSDSATSSSKNKPQKGVQPPQKEDNFNQLNLAI
VGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLRGKGPFAYAWALDESAEERERGIT
MTVGVAYFNTKCYRVVLLDSPGHRDFVPNMISGATQADAAILVIDASVGAFEAGIDATGG
QTREHAQLIKSFGVDQIIIAVNKMDAAGYSKERFNAIKKQLGTFLRACKFKDSSVAWIPV
SAMENQNLVTGPSEARLSSWFQGPCLLDAIDSLQLPQRDYSKPFLLPICDVVRAQSQGQV
SICGKLERGALQTGNEVQVLLMPSREMATVRSLERDSQVCNSAKAGDSVTINLQGIDANH
VMAGGVLCHPEFPVPVANHLELKVLILDNSIPILIGSQLEFLVHHVKEAARVVRILSLID
PKTGKETKKSPRCLLAKQNAIIEVVLQGMVCIDEHSNCKALGRVSLRSSGRTVALGLVTR
IIVKKE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaggtaaattatggagttaattacgaggaagattttgatgactatgaagat
tatggttatgactgtgatgatgggtgcggttatgcagaggaagatggtacgccaccagaa
acaaggtcaaaacaggagttggataacgctggcgtttggcgttgtcccatttgcactttt
gataatgaagatactatgaatgcatgtgatatatgtggagtgcttcgtcatccattggtc
aaaaattgtgccggcagcaaagaaaatgcagttggtggcatatgtaaagattctggagca
tctgtaatggcgaagtctctgtttgcatcgctgctgcttcagaaaccaaaaaaggctgta
aattttgaagcacagaattactcttttaagactgaagactgctttaacctctacaagcct
ggaaatatgtgtggacattttcatgatttacacacagctttttgctctcaaagccattgc
aagattgatatagtacctttcaagtttgacccccagtctccagatgattcagtactgagt
ggaataataccatccagattacgtcccaaagctgatactgacaaggtcttacagttaaat
gtcccatcaaataacaaacaactaagtactgaagttaaaaaagatttggctgctgaaggg
catccaagctcatacacatcattagcaaaagatgatttgaaggatagtgattcttcctcg
aaaactaggggaaatgatggtgttacaagcaacttgaatgatatgtctatatcatcaaag
cctcgcagtgtggatactagaaagagtgacagtgcaacatcaagctcaaagaataagcct
cagaaaggtgtacagcctcctcaaaaagaagataacttcaaccagttaaatcttgcaatt
gttggccatgtggattctgggaagtcaacactgtcaggaaggttgctacaccttttgggg
cggatttcccagaaagaaatgcacaaatatgaaaaagaggccaagctacgaggaaaaggg
ccgtttgcttatgcttgggcattggatgagagtgctgaagaaagagagaggggaataact
atgacagtgggcgttgcttactttaacacaaaatgttaccgtgttgttctgcttgattct
ccaggtcacagggactttgtcccaaatatgatatcaggggcaacacaagcagatgcagca
attcttgtaattgatgcttcagtaggtgcatttgaagcaggtattgatgctactggaggt
cagacgagggagcatgcacaacttatcaaaagctttggggtggatcagattataattgct
gttaacaaaatggacgcagcgggatactccaaagaacgatttaatgcaattaagaaacaa
ttaggcacatttctccgtgcttgtaagtttaaagattcttcagtagcatggattcccgta
agtgccatggaaaaccaaaatttggtgacaggtccatcagaagcacggttgtcatcctgg
ttccaaggtccttgcctattggatgcaatagactctctccaacttcctcaaagagattat
tcgaagccattcttattgccgatatgtgatgttgtaagggcacagtctcaaggacaagtg
tcaatatgcggtaagttggagaggggagctcttcaaactggaaatgaggtccaggtttta
cttatgccatcaagagaaatggcaacggtgcgttctttggaacgtgattctcaggtttgt
aacagtgcaaaagcaggagacagtgtcactatcaacctacaaggtattgatgcaaatcac
gtgatggcggggggtgtcttgtgccaccctgaatttcctgttccagttgcaaatcatttg
gaactgaaggttctcatcctggacaattccattccaattttaattggctctcagttggag
tttcttgtacaccacgttaaagaggctgcacgagttgtgaggattttgtcattgattgat
ccaaagaccggaaaggagaccaagaaatcacctcgatgtcttctggcaaagcagaatgct
atcattgaggtggttttgcaaggaatggtttgcatcgacgagcattctaattgtaaagct
ctcggaagggtctccctcaggtcatctggaagaaccgttgctcttggtctggtgactaga
attatagtgaagaaggaataa
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