Nicotiana tabacum (common tobacco): 107788970
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Entry
107788970 CDS
T04643
Name
(RefSeq) putative CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107788970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107788970
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107788970
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107788970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
107788970
NCBI-ProteinID:
XP_075075072
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All DBs
Position
8:complement(10569957..10571342)
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AA seq
275 aa
AA seq
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MSLLPKSDSIHIREVWSDNLEQEFDLIREIVDEYPYIAMDTEFPGVVLRPVGNFKNSNDY
HYQTLKDNVDLLKLIQLGLTFSDENGNLPKCGTDKYCIWQFNFCDFNPNEDVYANDSIEL
LRQSGIDFKKNIEKGIDATRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKILTCQDLP
DTQTGFFNLINMYFPVVFDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA
CTFRKLKENFFSGSMEKYAGVLYGLGVVENGQNVH
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttacccaaaagcgattcgattcacattcgagaagtatggagtgacaatctg
gaacaagagttcgatttgatccgagaaatcgtcgatgagtatccgtacattgcaatggat
acggaatttccaggtgttgttcttcgacctgtcggaaatttcaagaacagtaacgattat
cattaccaaaccctaaaggataatgtggatttgttgaagttaattcagttggggttaaca
ttctctgatgaaaatgggaatttaccaaagtgtggtactgataaatactgcatttggcag
tttaatttctgtgattttaatccaaatgaggatgtttatgctaatgactcaattgagttg
ttgaggcagagtggcattgatttcaagaagaatattgaaaagggtattgatgctacgaga
tttggtgagcttttaatgtcttcaggaattgtgctaaatgataatgtgtattgggttaca
tttcatagtggttatgattttggttacttattgaaaatcttgacttgtcaggatttgcct
gatactcaaacaggtttctttaacttaatcaacatgtattttcctgtggttttcgatatt
aagcatttgatgaagttctgtaatagtcttcatggtggattgaacaagcttgctgagttg
ttggaggttgagagagttggagtttgccatcaggccggttcggatagcttgcttacagct
tgtacttttaggaagttgaaagagaacttctttagtggatcaatggaaaagtatgccggt
gtcttgtatggtctaggtgttgttgagaatggacagaatgtccattga
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