KEGG   Nicotiana tabacum (common tobacco): 107789072
Entry
107789072         CDS       T04643                                 
Name
(RefSeq) putative splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107789072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107789072
Spliceosome [BR:nta03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107789072
 Complex B
    107789072
 Complex C
   U2 SnRNP specific factors
    107789072
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 107789072
NCBI-ProteinID: XP_075104096
UniProt: A0AC58U3P1
LinkDB
Position
24:complement(65881..70813)
AA seq 856 aa
MPFGVRLGFFPLFLALGFSQKSKQPLLATVHRLTPRRATPLLFKSSTGIEMLSTTPILPL
PAPPLDGNLGPTPPAQVVEEPKDDNMEENEEDTNKANNVSTSVATHTRTIGIIYPPPDIR
SIVDKTAQFVAKNGPEFEKRIVLNNAGNAKFNFLNASDPYHAYYQHRLAEARSQNQASGE
QPTQPADQEAAPAPPTADGAEATARPDPSVQFRPVRRVLEPPEAEQYTVRLPEGITGEEL
DIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKG
LTDKLRKSAADMTTVLERCLHRLEWEKSQEQARQKAEDEIEQERLQMAMIDWHDFVVVET
IDFADDEDLDLPPPMTLEEVIRRSKMPTLEEEEYVEPGKEVEMEMDEEEVQLVEEGMRAA
TLQENGDVKSVETMAIPEEQDPPMRIVKNWKRPEERIPAERDPTKYVVSPITGELIPINE
MSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTRPDIFGTTEEEVSN
AVKAEIEKKKEEPKQVIWDGHTGSIGRTASQAMSQNTNADDQNDAANDERNLPGPQAPPP
PRPGFPSVRPLPPPPGLALNIPRPPNTVQYSTSTSAGVAAPPRPPMVNMIPQVRPPPPPM
PQMLGQQNLMVNRPPMPPSVAMNSHGHPIPPPPGSQFTPLGAPRPFVPLPMSQPGMSMVP
PPPIPQGMPPPPPPEEAPPLPEEPEPKRQKLDESVLIPEEQFLAQHSGPARINVSVPNTD
EGNLKGQVLEITVQSLSETIASLKEKISGEVQLPANKQKLSGKAGFLKDNLSLAYYNVAS
GETLSLSLRERGGRKR
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgccctttggagttaggctaggtttctttcccttgtttctagcgctaggtttctctcaa
aaatcaaaacagccgctgcttgctacggtacaccgcctaactcctcggcgagcgactcct
ctcctcttcaagtcttcaacagggatagaaatgttgagcaccacgccaatattacccctt
ccagcgcccccgttggatgggaatctgggaccaacacctccagcgcaggtggtagaggaa
ccaaaggatgataacatggaggaaaatgaagaggacaccaataaagccaataatgtttca
acgtctgttgcaacacatactagaaccattggtatcatttatccgcctccagatattagg
agtattgtcgacaagactgcacagtttgtggcgaagaatggcccagaatttgagaagagg
attgttctaaataacgctggcaatgcaaaatttaacttcctgaatgcttctgatccttac
catgcctattatcagcaccgtttggctgaagctcgttcacagaatcaggcttctggagag
cagcctactcaaccagcagaccaagaagcggcccctgctcctcctaccgctgatggtgct
gaggcaactgctaggcctgatccgtcagttcagtttagacctgtcagaagggttcttgag
ccacctgaggcagagcaatatactgttagactccctgaagggatcacaggtgaagaattg
gatatcattaagcttacagcacaatttgtggccagaaatgggaagtctttcttaacaggg
ttgacgagcagggagattaataatccgcagtttcattttctaaagcctactcacagcatg
ttcatgtttttcacttcacttgcggatgcgtactcgaaagttctgatgcctcctaaaggc
ttgacggataagctgcggaagagtgccgctgacatgacaacagtcctggagcgatgtctg
catcgattggagtgggaaaagtcacaggagcaggctaggcagaaagctgaagatgagata
gaacaggagaggttgcagatggctatgattgattggcatgattttgttgtcgttgagact
atagattttgctgatgatgaagatctggatttacctccacctatgacccttgaggaggtt
ataaggaggagcaagatgcctacattggaggaagaagagtatgttgagcccggaaaagag
gtggaaatggagatggatgaagaagaggtgcagctagtcgaagaaggtatgagagctgcg
actcttcaagagaatggtgatgtcaagagtgttgaaaccatggcaattccagaggaacag
gacccacctatgcggattgtgaagaactggaagaggcctgaagagaggatccccgcagaa
agggacccaactaagtatgttgtctctcctataactggtgagctaatacctattaatgaa
atgtctgaacatatgaggatctctctcattgatccgaagtacaaggaacagaaagacagg
atgtttgcgaagattaaggagacaactcttgcgcaggatgatgagatttctaggaacatt
gttggacttgcaagaacccgtccggatatatttggtactacggaagaagaagtttcaaat
gcggtcaaggctgagattgagaaaaaaaaggaagagccgaagcaggtcatatgggatggt
cacacaggtagcattggtcgcactgcaagccaggcaatgtctcagaacactaatgcagat
gatcagaatgatgctgcaaatgatgaaagaaaccttcccggtccgcaggctcctccacct
cccaggcctggttttccatctgttaggccactacctccacctcctgggcttgcgctgaat
attcctaggcctcctaatacagtccagtattccacctccaccagtgctggggttgctgct
ccacctcgacctcctatggttaacatgattcctcaggttcggcccccacctcctcccatg
ccacagatgctaggtcagcaaaatctgatggtaaatcgtccaccaatgcctccatcagtg
gccatgaattcacatggccatcctattccaccacctcctggatcacagtttacacctttg
ggagcacctcgaccctttgttcccctcccgatgtcccagcccggaatgtctatggttccg
cctcctcctattccccaaggaatgcctcctcctcctccaccagaagaagcccctcctcta
cctgaagagccagagccgaagaggcaaaagcttgatgagtctgttctcattcctgaagag
cagtttttggctcagcactcgggtcctgcaaggatcaatgtatctgtgccgaatactgac
gaagggaatctcaaaggacaagttctggaaatcacagtgcaatctctgtctgaaaccatt
gccagtctaaaagagaagatttccggggaggtccagcttcctgcaaacaaacaaaagctg
agtggaaaggctggttttctcaaggacaacttgtctcttgcatactataatgttgcatct
ggagaaactctcagtctctctctgagagaacgtggtggcagaaagagatga

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