Nicotiana tabacum (common tobacco): 107789081
Help
Entry
107789081 CDS
T04643
Name
(RefSeq) small RNA degrading nuclease 1 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107789081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107789081
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
RNases
107789081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
BRAP2
RRM_1
Motif
Other DBs
NCBI-GeneID:
107789081
NCBI-ProteinID:
XP_016466366
UniProt:
A0A1S3ZPQ6
LinkDB
All DBs
Position
24:94900714..94906293
Genome browser
AA seq
498 aa
AA seq
DB search
MDSKFASSAKKEVLVEIVKLAQKRQMKGSSGGWKDFLRSHDKKLGVSLSDPSKRSVDDLL
AFLKTFSQEDDIKLFKKVFQCYSNRDAVEKLQKKSPDSESAEQGLVRLTFEHPQYPTDYS
FPSHEEDWLVTRRTKKSNFVKSKKAMIAIDCEMVLCQDGTEALVRICAVDDKLEVKLNEF
VNPNKPIADYRTEITGITAGDLDGVSCSLADVQMSMKKLLSHGTILIGHSLHNDLRALKI
DHARVIDTSYVFKYRDQPSNRRPSLSNLCKSVLGFELRKKDSPHNCLDDACTAMKLVLAK
IERGVDCIIPLVREEVQEPKVAKLLVHRIPVAVHSEELHKVIPGDFTLEVKQANKKGQAD
KYSAFVNFKNQQEANEAFEKLEGNQDKDSVGRPQKLVSFHLDSGISGVLCVCKMATNNLD
IEVNPMKRSSVDEETVREPKKPRIEDQCTELKEAGAGCSQCETHVTEIERLKKELNHRDD
EISNLNKLIVNLVRKQGL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaagtttgcctcatcagcgaagaaagaggttctagtcgaaattgtcaagtta
gctcaaaagcgacagatgaaaggaagtagcggaggttggaaagattttttgagatcacac
gacaagaagttaggggttagcttgagtgacccgtcgaagaggtccgttgatgatctgctt
gcgtttttgaagacgtttagccaagaggatgacataaagctttttaaaaaggtgtttcaa
tgttattccaatcgagatgctgtagagaagcttcagaaaaagtcgccggatagtgaatcc
gcggaacagggactggttcgtttaacttttgagcaccctcaatacccgacagattactca
tttccatcacacgaggaggactggttagtcacgagaaggactaaaaagtctaatttcgta
aaatcaaaaaaggcaatgattgcaattgattgcgaaatggttctttgccaagatggaacc
gaagctttagtcagaatctgtgctgtggatgataagttggaggttaaactcaatgaattt
gtgaatccaaacaaaccaattgcagattacagaactgagattactggaataaccgctgga
gatttagatggagtttcttgttcattggctgatgtacagatgtccatgaagaagctatta
tcacatggaaccatattgattggccacagtttacacaatgaccttcgtgctttgaagata
gatcatgcaagagtgattgacacatcttatgtcttcaaatatcgggatcagccttctaat
agaagaccttctttaagtaatttgtgtaagtctgtgttaggttttgaacttcgaaagaag
gactctccacataattgtctggatgatgcatgtactgcaatgaaacttgttcttgccaag
attgaacgtggagttgattgtatcataccgttagttcgtgaggaggtgcaagagcccaag
gtggcaaagctacttgtccacagaataccagtggctgttcatagcgaagagttacacaaa
gttattcctggagactttaccttagaagttaagcaggctaataaaaaagggcaagcagac
aagtattctgccttcgtcaatttcaaaaatcagcaagaggcaaatgaggcatttgaaaag
cttgaaggcaaccaagataaggattctgtgggacggccacaaaagctcgtttcatttcat
cttgattccggtatatcaggggttttgtgtgtttgtaagatggccaccaataacttagat
atagaggttaacccaatgaagaggtcatctgtagatgaagagaccgtgagagagccaaag
aaaccgagaatagaagaccaatgtacggagctcaaggaggctggtgcaggttgtagtcag
tgtgaaactcacgtgacggagattgagaggctaaagaaagaattaaaccacagagatgat
gaaatctccaacttgaacaaactcattgttaaccttgtgagaaaacaaggattgtaa
DBGET
integrated database retrieval system
