Nicotiana tabacum (common tobacco): 107789168
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Entry
107789168 CDS
T04643
Name
(RefSeq) replication factor C subunit 3-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03030
DNA replication
nta03410
Base excision repair
nta03420
Nucleotide excision repair
nta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107789168
03410 Base excision repair
107789168
03420 Nucleotide excision repair
107789168
03430 Mismatch repair
107789168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nta03032
]
107789168
03036 Chromosome and associated proteins [BR:
nta03036
]
107789168
03400 DNA repair and recombination proteins [BR:
nta03400
]
107789168
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107789168
DNA Replication Termination Factors
ELG1-RFC complex
107789168
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107789168
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107789168
Check point factors
HRAD17(Rad24)-RFC complex
107789168
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
RsgA_GTPase
COMPASS-Shg1
AAA_lid_RFC1
EnY2
Mst1_SARAH
RuvB_N
AAA_25
Motif
Other DBs
NCBI-GeneID:
107789168
NCBI-ProteinID:
XP_016466433
UniProt:
A0A1S3ZQA3
LinkDB
All DBs
Position
19:complement(146639817..146645507)
Genome browser
AA seq
681 aa
AA seq
DB search
MPSLSIPRSKSVPCNISETQNCPTNSFTIPPSVRSSKSADSLKPTWPKNANELISRKGGS
SSKNSNLTAGNLAEFNKRNAIQEEKRYSARSPYYKGLTDSSKVINRQKLLAEFSSSPGKD
SISASSTSSSSKSNLASKVQEWSASYFVRKGKEERTSFSLNTSIGNKNIQDSSSSETKDK
GVIRTTIGEELGIDRKGVRKCSRKSRQRLSKSDKGKPLRERASEMQTNIVVLPPAPAPPI
TSPPKLSIPSPPPTPLILQTSLQDEEIEAVPLPASPTQTTEDEKDTTKEQDITSPEQKDK
RFKWADKYRPNALKDFLCNRNTALELKALAETDGSNRHYIFAGQPGVGKRTMIFALLREV
FGHDKIQAREKCKVFYLKGEAVPSIQVNVKESKKHVEINLSETKGYEKHVIVELINERKH
KASIRSAPCHHDDCKAIILGEADKLSTDVLLYTKWMLERYTGCYKVFFCCSDITKLQPIK
SICKVVHLQKPSDDEIVDVLEFIAKKEEIELPHKLAAQIASNSKSNLRQAIRSFEATWHF
NTCLTENQEIKTGWEDDIAKIAKNIIEEQSPKQLYDIRGKLQNLIEHNVSAEFIFNTLVE
ELKSNLDDQFHKEIDNLKMKYNINSKDLEQGKSDNDAVKKIVLQFMKVEEFIAKFMSWYK
TSVLKKGNHNPSQAYPSKGNN
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtctatcaatcccacgttcaaaatctgttccctgcaacatatcagaaactcaa
aattgtcctacaaactcatttacaatacctccttcagtcagatcctccaaatcagctgac
tcattaaaaccaacatggcctaaaaatgcaaatgagcttatatcaagaaagggtggctca
tcttcaaagaactcaaatttaacagctggtaatctcgcggaattcaataaaagaaatgca
attcaagaagaaaagagatactcagcaagaagtccatattataaaggacttactgattcg
tccaaagtgattaatcgacagaagttattagcagagtttagtagtagtcctggaaaagat
agcatatcagcttcttctacaagttcaagttctaaatccaatttagctagcaaggtacaa
gaatggagtgcatcttactttgtacgcaaaggcaaagaagaaagaacatccttctccttg
aatacttctattgggaacaagaacatccaagattcatcttcatcagagacaaaagataaa
ggagtaatcagaacgacaatcggagaagaacttggtatagatcggaaaggagttagaaaa
tgttcaagaaaaagcagacagagactttcaaaatcagataaggggaagcctttgagggag
agagcatcagaaatgcaaacaaatatagtagtactaccaccagcccctgcaccaccaata
acatcaccaccaaaattgtcaataccatctccaccgccaactccattaatattgcaaaca
tcattgcaagatgaagaaattgaagcagtaccattaccagcttcaccaactcaaactaca
gaggatgaaaaagatactacaaaggagcaggatattacaagtccagaacagaaagacaaa
agatttaaatgggctgataagtataggcctaatgctcttaaagattttctatgcaataga
aatactgcacttgaactgaaggctctggcagaaacagatggcagtaatcgtcattatata
tttgcaggacagccaggagtagggaaaagaaccatgatatttgctttgcttcgcgaagtt
tttggacatgataaaatacaggcaagagaaaagtgcaaggtgttctacttaaagggagaa
gcagtgccgagcatccaagtaaatgtgaaggaatcaaagaaacatgttgagatcaatctc
tctgaaactaaaggctacgagaaacatgtcatcgtagaactaatcaatgagagaaagcac
aaagcatccatcagatcagcaccttgccatcatgatgactgtaaagctatcattcttggt
gaagctgacaagctatcaacagatgttttgctatataccaaatggatgttagaaagatat
acaggttgttataaggtcttcttttgctgcagtgatatcaccaagctccagccaattaag
tctatttgtaaggttgttcatctccaaaaaccttcagatgacgagattgtagacgtcttg
gaattcatagcaaaaaaggaagaaatagaactaccacataaactggcagcacagattgct
agtaactccaaaagtaacctacgtcaagcaattcgctcttttgaagctacttggcacttc
aacacttgcttgactgagaatcaagaaatcaagacagggtgggaagatgacattgcaaag
attgctaaaaacataattgaggagcaaagcccgaagcagctatatgatatccgtgggaag
ctgcaaaatttgatagagcacaacgtgtctgctgagttcatctttaatactttggtagaa
gaactaaagagtaatttggatgaccaattccacaaggaaattgacaatctgaaaatgaag
tacaatataaattcaaaggatctggaacaaggaaaaagtgataatgatgcagtgaaaaag
attgttctccaatttatgaaggttgaagagttcatagctaaattcatgagctggtataag
acttcagttctgaagaaaggaaatcacaacccctcacaagcctatccctccaaggggaat
aattag
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