Nicotiana tabacum (common tobacco): 107789182
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Entry
107789182 CDS
T04643
Name
(RefSeq) TATA-box-binding protein-like isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107789182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nta03000
]
107789182
03021 Transcription machinery [BR:
nta03021
]
107789182
Transcription factors [BR:
nta03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
107789182
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107789182
RNA polymerase III system
TFIIIB
107789182
RNA polymerase I system
SL1/TIF-1B
107789182
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
107789182
NCBI-ProteinID:
XP_016466446
UniProt:
A0A1S3ZQ13
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All DBs
Position
6:complement(34653413..34656989)
Genome browser
AA seq
200 aa
AA seq
DB search
MAEVGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtgggtctagaagggagccaaccagtggatttgtctaagcacccatctggg
attgtgcctactcttcagaatatcgtctcaactgtcaacttggattgcaagttggatctt
aaagctattgcattgcaagcacgtaatgctgaatacaatccaaagcgttttgctgctgtt
attatgaggataagagaaccaaagactacagctttgattttcgcatctggaaagatggtt
tgcaccggggcaaagagtgaacaatcatctaagcttgcagcaaggaagtatgcaaggata
atccagaagcttgggttcgatgccaaatttaaggatttcaagattcagaatatagttgga
tcctgtgatgtgaaatttcccattagacttgaaggtttggcgtactcgcatggtgctttt
tcaagttatgaaccagaattgtttccaggattgatataccgaatgaagcaacccaagatt
gtgctgctcatttttgtgtctggcaagattgtcctcactggagcaaaggtgcgggatgag
acatatactgcttttgagaacatctaccctgtgcttacagagttcaggaagaaccagcaa
tga
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