KEGG   Nicotiana tabacum (common tobacco): 107789207
Entry
107789207         CDS       T04643                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107789207
Spliceosome [BR:nta03041]
 Complex B
  Other components
   Complex B specific factors
    107789207
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd WD40_RFWD3 DUF7165 Beta-prop_WDR19_1st Beta-prop_HPS5 VPS8_N Mala_s_1-like Beta-prop_IFT122_2nd Beta-prop_NOL10_N Beta-prop_IP5PC_F Beta-prop_LRRK2 Nucleoporin_N zf_topless
Other DBs
NCBI-GeneID: 107789207
NCBI-ProteinID: XP_016466468
UniProt: A0A1S3ZQE4
LinkDB
Position
Un
AA seq 514 aa
MSSTLEIEARDVIKIVLQFCKENSLHQSFQVLQNECQVSLNTVDSLETFVADINSGRWDA
VLPQVAQLKLPRHILEDLYEQIVLEMIELREMDTARAILRQTNVMGVIKQEQPERYLRLE
HLLVRTYFDPHEAYADSTKEKRRAQIAQALSQEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDEEDMYPTTLGHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSIAFSRDGTQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTS
DGSRVITASSDGSVKVWDSKTTECLQTFRPPPPLRGGDASVNSVHLFPKNTDHIIVCNKT
SSIYLMTLQGQVVKSFSSGKREGGDFLAACLSPKGEWIYSVGEDRNLYCFGFQSGKLEHL
MKVHEKEVIGITHHPHINLVATYGEDCTMKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtcttctacccttgaaatcgaagctcgagatgtgattaagatagttcttcaattttgc
aaggagaattcattgcatcaaagttttcaggttttacaaaatgagtgccaagtttcactg
aatacagtggatagtcttgaaacatttgttgctgatattaatagtggaagatgggatgca
gtattacctcaagttgctcaacttaagcttcctagacatatacttgaggatttgtatgag
cagatagttttggaaatgattgaacttcgggagatggatactgcaagggctattttaaga
caaacaaacgtgatgggtgtcattaaacaggagcaaccagaaagatatctgaggcttgaa
catctgctagtccggacttactttgatccacatgaggcttatgcagattcaaccaaagaa
aagaggcgtgcacaaattgcacaagcactctctcaagaggtttctgttgttccaccttca
cgactaatggctttgatcggtcaggccctgaagtggcagcagcatcaaggtctacttcca
cctggtactcaatttgacctattccgaggaacagctgccatgaaacaagatgaagaagat
atgtatccaacaactcttgggcacactattaagttcgggaagaaaagtcacccagagtgt
gctaggttctcaccagacggacaattccttgtctcatgttcagttgatggatttattgag
gtttgggaccacataagtggaaaactgaagaaggatctccagtaccaggctgatgaaacc
tttatgatgcatgatgatgctgtcctttgtgttgatttcagcagagactcggaaatgctt
gcatctgggtctcaagatggaaaaataaaggtttggcgcataaggacgggtcagtgcttg
cgccgtcttgaacgtgcacactctcagggtgtcaccagtatagccttctctcgagatgga
actcagatcttaagcacgtcatttgacagcacagcaagaattcacggtctgaagtcagga
aagttgttaaaagaatttcgcggccactcgtcttatgttaatgacgctatctttactagt
gatggatctcgagtcattaccgcatctagtgatggctcagtgaaggtctgggattcgaaa
acaaccgagtgtctacaaacatttagaccgccacctccattaaggggcggtgatgcatct
gtgaactctgtccatcttttccctaagaatactgaccacattattgtgtgtaacaagaca
tcatctatttatctcatgacacttcaaggacaggttgttaaaagtttctcatctggtaaa
agagaaggtggagattttctcgctgcttgtctatcaccaaaaggtgaatggatttactct
gttggtgaagacagaaatttgtactgctttggttttcaatcaggcaaactggagcatctg
atgaaggtacatgaaaaggaagttattggtattacacaccatcctcatataaaccttgtt
gccacatatggagaagactgcactatgaaactatggaagccttag

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