Nicotiana tabacum (common tobacco): 107789285
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Entry
107789285 CDS
T04643
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1
KO
K03255
protein TIF31
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nta03012
]
107789285
Translation factors [BR:
nta03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107789285
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
TPR_8
CLU
Motif
Other DBs
NCBI-GeneID:
107789285
NCBI-ProteinID:
XP_016466544
UniProt:
A0A1S3ZPT9
A0A1S3ZQ90
LinkDB
All DBs
Position
7:complement(146121684..146136854)
Genome browser
AA seq
1898 aa
AA seq
DB search
MAPNKNGRGKTKGDKKKKEEKVLPVVMDIMINLPDETQVILKGISTDRIIDVRRLLSVNT
TTCNITNFSLSHEIRGPRLKDTVDVSALKPCLLNLVEEDYDEESATAHVRRLLDIVACTT
SFGPSGSSGKELKSETSKNARGAQDNKSAKKSNKVRANDKLPSPPQSPTPTPAQQLGKDA
AAVDVEGEMSNTCPKIGSFYEFFSLSHLTPPLQFIRRATRQQDDEVLPDDHLFSLEVKLC
NGKLVIIEACRKGFYNFGKQGILCHNLVDLLRQLSRAFDNAYDDLMKAFLERNKFGNLPY
GFRANTWLIPPVGAQLPSIFPPLPVEDEKWGANGGGLGRDGKSDLLPYANEFLNVASMPC
KTTEERQIRDRKAFLLHSLFVDVAIFRAISAVKHVMENVKPAHCDSNGEIIFNETVGDLS
VFVTKDASNASCKIDTKIDGFQATGIAVKNLMERNLLKGITADENTAAHDIATLGVLNVR
HCGYIATVKVQGKENDKVDNPLESMELPDQPDGGANALNINSLRLLLHKKVDNKVGHSKP
SAAEEMTCYQAFVRRILEQSLTKLEEEKIEGDSFIRWELGACWIQHLQDQKKSEKDKKNP
VEKTKNEMKVEGLGIPLKSLKNKKKNTDGANMESQSESFKSVTNDVGGGSEKGIPQSGNS
QFESDTDQNQLVLKTLLSDAGFTRLKESETGLHLKSLEELIDLSQKYYNEVALPKLVADF
GSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILQAV
IASVVDIEDMAAIIAAALNMMLGVPVNDESNESHGVDSLIWKWLELFLKKRYEWDVGSLN
YKDVRKFAVLRGLCHKVGIELVPRDYEMSSPNPFQKVDIVSLVPVHKQAACSSADGRQLL
ESSKTALDKGKLEDAVSYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIY
QQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPN
TAATYINVAMMEEGLGNVHVALRYLHKALKCNQKLLGPDHIQTAASYHAIAIALSLMEAY
PLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTKKPDASIASK
GHLSVSDLLDYINPNPDAKGRDVGSKRKGFVSKAFISQVKGQSDQSNVTSPNSDTPKDVL
KEESDEEKQIVEDHTDPQMNLEPVDTVVKSHHNGDEEIAEDKPVHLVKEASIVKPVVREV
LSEPSAEAEDGWQSVQRPRSGGFYGRRRRQRRQTISKVIGYQKKDSVSEVDHAKLKNNYQ
ASKYYVLKKRTSPGSYADYYIAKNQSPGTKLGRRVIKAVTYRVKSVPSSVRDAVPEISTT
GGDLLDTLSEQVQVSATKEVVSLPKRSSIVNLGKSPSYKEVALAPPGTISMLQERVSENE
VPDNQDVLKVGEESSGAEENSETMKKDAESVKEENIQDLVTDSADQVQNETQDTDNKEEI
QLSDLKGGEISDVISANASIQPSHVDVSPMEQGSVQAHNVPTSDNSPKVDLCEKDSSSNL
DPSCISNLTLQDMDHLKVTAASSLTCDASRELSRKLSASAAPFSPSPAIARVAPLPMNIN
LPSPPGTLPPVGPWPMNMSLHQGPPTMLPNPMCSSPHHLYPSPPHTPNMMHPLRFMYPPY
SQPQTLPPSTFPMSSSNFHPNHYAWQCNIPPNASEYVPATVWPGCHPVEFSISPPVIEPL
TDSISAAKEPSDNPESIILATSLPVDLNTGDEVKEEVNLPASETGESLAAVGSEKERASS
ISNSHFVTLSSNQLEEGNGSNENAVQRNPTETDKEKTFNILVRGRRNRKQTLRMPISLLK
RPYSSQPFKAVYSRVIRETEVPRSTSFDSHEHGIATAT
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaacaagaatggtcgtggcaagacgaagggagacaagaagaagaaggaagag
aaggttcttccagttgtaatggatatcatgataaaccttccggacgagactcaagttatt
ttaaagggaatatctacggataggattattgatgttcgtcgattactatcagtgaacaca
acaacttgtaatatcaccaatttctccctatctcatgagataagaggcccacgtttaaaa
gatacagtggacgtttccgcactgaagccctgcctcctgaatcttgtcgaagaggattac
gatgaagaaagcgccacagcgcacgttagaaggctgctggatatcgttgcttgtacgacg
agttttgggccgtcgggaagtagtggcaaagagttgaaaagtgagactagcaagaatgcg
cggggtgcgcaggataacaagagcgccaaaaagtccaacaaggttcgggcaaatgataag
ctaccgtccccgccacaatcgccgacgccgacgccagctcagcagctgggtaaagatgcg
gcggcagtggacgtagagggagaaatgagcaatacgtgccctaagattggaagcttctat
gagttcttctcgctttctcatctcacgccccctcttcagttcataagaagggcaactaga
cagcaagatgatgaagttttgccagatgatcatcttttctctcttgaagtgaaactttgt
aatgggaagctggttatcattgaagcttgcagaaaaggattttacaactttggaaagcag
gggattctttgtcacaatcttgttgatttgttgagacaactcagtagagcatttgacaat
gcttacgatgatctcatgaaagcattcttagaacgtaataagtttgggaatcttccgtac
ggtttcagagccaacacatggcttataccacctgtgggagcacagttgccatctatcttc
ccacctctacctgtggaggacgaaaaatggggagcaaatggaggtggtctaggtcgagat
ggaaaatctgatttgttaccttatgccaatgaatttttgaatgttgcatccatgccttgt
aagacaacagaggagaggcagatccgagacaggaaggcttttcttcttcatagtttattt
gttgatgtcgccatttttcgagctatttcagctgtaaagcatgtcatggagaatgtcaaa
ccagctcattgtgattcgaatggagaaatcatttttaatgagacagttggggacttgagc
gtgtttgttaccaaagatgcctcaaatgctagttgcaaaatagataccaaaattgatgga
tttcaagcaactggaatagctgtgaagaatctgatggaaagaaatctactgaaggggata
actgctgatgaaaatactgccgcccatgatattgctactttaggtgttttgaatgtaagg
cattgtggttacattgcaactgtaaaagttcaaggaaaagaaaatgacaaagtggacaat
ccactggaaagcatggaacttcctgatcagcctgatggtggtgcaaatgccctcaatatc
aacagtttacgcttgctccttcacaagaaagtggataacaaggtagggcattcaaaacct
tcagcagctgaagagatgacttgctatcaggcatttgtaaggagaatactagaacagagt
cttaccaagcttgaagaagagaaaatagaaggtgactctttcatcagatgggaacttggt
gcatgctggatacaacacttgcaagatcagaagaaatcagaaaaggacaaaaaaaaccca
gttgagaagacaaaaaatgagatgaaagttgaagggcttggaatacctcttaagtcactc
aagaacaaaaagaagaacacagatggggctaacatggaatcccagtctgaaagcttcaaa
tctgtcacaaatgatgtaggagggggatcagaaaaaggcatcccgcagtctgggaattct
cagtttgagagtgatacggatcaaaatcagcttgtactcaagacattgttgtctgatgcc
ggttttactaggttaaaagagtcggagactggacttcaccttaagtctttggaagagctg
attgatctgtcacagaagtattacaacgaagttgcccttccaaagctggttgctgatttt
ggctctttggaactctcaccagtagatggtcgaactttaactgatttcatgcatacccgg
ggtctacgtatgcgttctcttggacacgtagttaaactttccgagaagttatcacatgtt
caatctctttgtatacacgagatgatagtccgggcttttaaacatattttgcaagcagtt
attgcatctgttgttgacattgaggatatggctgcgataattgctgctgccttgaatatg
atgcttggggtacctgtaaatgatgaatcaaatgagtctcacggcgttgattctttgatc
tggaaatggctggaactatttttgaagaagcgatatgaatgggacgtagggagcctaaac
tacaaagatgtgaggaaatttgcagttcttcgtggtttatgccataaggtgggaattgaa
ctggttccaagagattatgaaatgagttccccaaatccttttcaaaaagtagacattgtc
agcctagtaccagtgcataagcaagctgcttgctcttctgcagatggtaggcagcttttg
gaatcatccaaaacagctctagataagggaaaacttgaagatgctgtcagctatgggact
aaggctcttgctaagctggttgcagtatgtggtccataccatcggatgacagctggagct
tatagccttcttgctgttgttctgtatcacaccggtgattttaatcaggccacaatctat
cagcaaaaggccttggacataaatgaaagagagttgggcctcgatcacccagacaccatg
aaaagttatggtgatcttgcagttttctattaccgacttcaacacacagagttggctctc
aagtatgtaaaacgagctctttatctgttgcatctcacatgtggcccctcacatccaaac
actgcggcgacatatataaatgtggcaatgatggaggaagggcttggtaatgtgcatgtt
gccctcagatatctccataaagctttgaagtgtaaccagaagttacttggtcctgaccat
attcagacagctgcaagttaccatgctatagcaatcgcactctctttgatggaagcttat
cctttgagtgttcagcatgagcaaacaaccttgcagatactccgagcaaagcttggtcca
gatgatcttcgcactcaggatgctgctgcatggcttgagtattttgagtcaaaggctttt
gaacagcaagaagctgctcggaacggaaccaagaagcctgatgcatcaatagccagcaag
ggtcatttgagtgtgtcagatttgctcgactacatcaatccaaatcctgatgccaaagga
agagatgttggatcaaaaagaaaaggttttgtctcaaaggcttttatttcccaggtgaag
ggacaatctgatcaaagcaatgttacctcaccaaactctgacactcctaaagatgtccta
aaagaagagtcagatgaggagaaacaaattgttgaagatcatactgatccccagatgaat
ttggaacccgttgacacagtagttaaatcccatcacaatggagatgaagaaattgctgag
gacaaacccgttcatttggtgaaggaagcttcaattgtgaagcctgttgtccgtgaagtc
ttatctgaaccttctgctgaagcagaagatggatggcagtcagtgcagagaccaaggtca
ggtggtttctatggacgaagacgaaggcagaggcggcaaaccatcagcaaggtcattggt
taccagaaaaaggactctgtttctgaggttgatcatgctaaactgaagaataactatcaa
gctagtaaatattatgtcttaaagaaacggacatcaccaggaagttatgcagattattac
atagcaaaaaatcaatctcctggtaccaaacttggtcgaagagtcataaaagctgtaacc
taccgtgtcaagtctgtgccatcatctgtcagagatgctgttcctgagatctccacaact
ggaggagatttgttagatactttgtcagagcaggtccaagtttctgcaacaaaggaggtt
gtgtcactaccaaagagaagctcgattgtaaacctaggaaaatctccttcctataaggaa
gtggcacttgccccaccaggtaccatctctatgttgcaggagagagtttctgaaaatgaa
gttcctgataatcaagacgttctaaaagttggagaggagagcagtggagcagaagaaaat
tctgaaacaatgaaaaaagatgcagaatccgtaaaggaagagaacattcaggatcttgtt
acagattctgctgatcaagtacaaaatgaaacacaagatactgacaacaaagaagaaatt
caactgagtgatctcaaaggtggtgaaatttcagatgtgatatctgcaaatgcatctatt
caacccagtcatgttgatgttagtccaatggaacagggaagtgtccaggctcataatgtt
cctacttctgataattctcccaaggtggatctctgtgaaaaggactcatcaagcaatttg
gatcctagctgtatctcgaatttgaccttgcaagacatggatcatctgaaggtaacagct
gcatcatctcttacatgtgatgcaagtcgagaattgtcgagaaagctatccgcatcagca
gcaccattcagtccctccccagccattgcccgtgtagcaccgttacctatgaacattaat
ctcccttctcctcctggaacactaccacccgttggcccttggccaatgaacatgtctctt
catcaaggaccaccaactatgttacccaatccaatgtgctcctcccctcatcacctgtac
ccttcacctccgcacaccccaaacatgatgcacccattgcgctttatgtaccctccgtat
tctcaaccccagacgttacctccaagtacgttcccgatgagcagcagcaatttccatccg
aatcattatgcttggcaatgcaatatacctcctaatgcatctgagtacgttcctgccaca
gtttggcctggctgccacccagtcgagttttctatatcaccacctgtgattgagccatta
actgactcaatttctgctgctaaggaaccatctgataaccctgaaagcattattttggca
acaagcttaccagtagatcttaacactggggatgaagttaaggaagaagtaaatcttcca
gcatcagagacgggggagagcttagctgcggttggatcagagaaagagagagcaagcagc
atttcaaattcacattttgttaccttgtccagtaatcaattagaagagggtaatggatca
aatgagaatgctgtgcagagaaatcctacggagaccgataaggagaagaccttcaacatt
ttggtacggggccggaggaaccgcaaacaaactctaagaatgccaattagtttgctcaag
agaccatattcctctcagcccttcaaagctgtatatagcagggttataagagagactgag
gttcccaggtctaccagctttgattcacacgaacatggcatagcaactgctacttga
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