KEGG   Nicotiana tabacum (common tobacco): 107789442
Entry
107789442         CDS       T04643                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107789442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nta03000]
    107789442
   03021 Transcription machinery [BR:nta03021]
    107789442
Transcription factors [BR:nta03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    107789442
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107789442
  RNA polymerase III system
    TFIIIB
     107789442
  RNA polymerase I system
    SL1/TIF-1B
     107789442
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 107789442
NCBI-ProteinID: XP_075095823
UniProt: A0AC58TF27
LinkDB
Position
19:complement(18879192..18888668)
AA seq 200 aa
MADQGLEGSQPVDLTKHLSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcggatcagggattggaagggagccaaccagtggatctcaccaagcacctttctgga
atagtccctaccctccagaatattgtgtcaacagtaaatctggactgcaagttggacctt
aaagccattgcacttcaagctcgaaatgcagagtacaatccaaagcgttttgctgcagtg
atcatgagaattagagaaccaaaaactacagcactgatttttgcttctgggaagatggtc
tgtactggagcaaaaagtgaacaacagtcaaagttggcagcacggaaatatgctagaatc
attcaaaagcttggttttccagccaagtttaaggattttaagatccagaatatagttggt
tcttgtgatgttaaatttcctattcgacttgaaggccttgcatatgcccacggtgctttc
tcaagttacgagccagaactattccctggattaatatatcgcatgaaacaaccaaaaata
gtgctgcttatttttgtttctgggaaaattgtcatcacaggagctaaggttagagatgag
acatatactgcctttgagaacatatacccagttcttactgagttcaggaagaatcagcaa
tga

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