Nicotiana tabacum (common tobacco): 107789600
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Entry
107789600 CDS
T04643
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107789600
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107789600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
NRDE-2
TPR_2
TPR_12
TPR_7
TPR_MalT
UTP6_C
TPR_11
Motif
Other DBs
NCBI-GeneID:
107789600
NCBI-ProteinID:
XP_016466924
UniProt:
A0A1S3ZRI6
LinkDB
All DBs
Position
Un
AA seq
812 aa
AA seq
DB search
MGDSETAVAQTSSVTDYKSAGYSSKVPDDAGTHTSSDAGNAGDLATPCPNGAGELASSNV
EAGNLYTTDAVSTQQESATAMTYEASQDLAALEDAAAGSSQAAVYDSSANGNNNTEARDI
AENGIASDVHGNSNMHQPEDGLALSPEEERLWSIVRTNSLDFNAWTSLIEETEKMSEGNI
LKIRKVYDAFLAEFPLCYGYWKKYADHETRLGSVDKVVEVYERAVQGVTYSVDMWLHYCV
FAISTYGDPDTIRRLFERGLVYVGTDYLSFPLWDKYLEYEYTQQAWSNVAAIYTQILQNP
NQQLDRYFEGFKELVASRPLSELRTPEEAAAAAEAGSEQIEGEVNSSSEPSKPVSASLKD
AEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELENWNNYLDFIEGG
DDFNKVVKLYERCLIACANYPEFWIRYVSCMETSGSLDLADNALARATQVFVKRQPEIHL
FAARLREQRGDIPGAQAAYQLVHAEISPGLVEAIIKHANMERRLGNLEDACSVYEQAIAI
EKGKEHSLSLPLLLAQYSRFLYLVSGKVEKAREILDQAVENVQLSKPLLEALIHLESIQS
LPKRIDLLDSLVDKFIVPSPENPSVASVDEREELSSIFLEFLDLFGDAASIKKADDRHAK
LFLRHRTSSDSKKRQADDYLVSEKTKLAKSAVAASNPSVAGAFPGAQNQWPAGYGVQGQT
WPQAAQAQPQQWNPGYAQQAAYGAYSSYGASYAPPQAPAPVPSSAGYGAYPSTYPAQAFP
QQNYAQPAAAPTLPPAPQATTVPPTAYYGSYY
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatagtgaaactgcggtagctcaaacctcgtcagtcactgactataaatctgct
ggttattcatcaaaagttcctgatgatgctggcacccatacttcttctgatgccggaaat
gctggggatttggccactccatgtccaaatggcgctggggagttagcatcttctaatgta
gaagctggaaacctatataccactgatgcagtgtctacccagcaagaaagtgctactgct
atgacatatgaggccagccaggatcttgcagctctagaagatgcagctgcaggttcatcc
caagctgctgtttatgactcttctgcaaatggcaacaacaatactgaagcaagagacatt
gctgaaaatgggattgcatcagatgttcatggaaattccaatatgcatcagccagaagac
ggcttagctttatctcctgaagaggaaagattatggagcatagtaaggacaaattctttg
gactttaatgcctggacttcccttattgaggagacggagaagatgtcagagggcaacatt
ttgaagattcggaaggtttatgatgcattcttggcagaatttcctctatgttacggttat
tggaagaaatatgcagatcatgagacacgtcttggctctgttgacaaagttgtggaggtc
tatgaacgagctgttcaaggcgtgacatattcggtagatatgtggttgcactattgtgtt
tttgctataagcacttatggagatcctgacaccattagaaggttatttgaaagaggatta
gtgtatgttggaacagactacctgtcttttccactttgggataagtacctggagtacgag
tacacgcagcaggcttggtcaaatgttgctgccatatacacacagatattgcagaatcca
aatcagcagctcgatcgctattttgaaggttttaaggagctggtggctagtaggcctcta
tcagagctacgaactcctgaagaagctgcagctgcagcagaagctggcagtgaacagatt
gagggagaggttaattctagttccgagccttctaaacctgtaagtgcaagcttaaaagat
gccgaggagttggagaagtatatcgccattagagaagagatgtataagaaagctaaagag
ttcgattctaagatcattggttttgaaacagctataaggaggccatactttcacgtgcgg
cctcttaatgttgcagagcttgaaaattggaacaattatcttgacttcatagaaggagga
gatgacttcaataaggtggtcaagctgtatgagagatgtctgattgcttgtgccaattat
cctgaattttggattcggtatgtttcgtgtatggaaacaagtggaagtttggatcttgcc
gataatgcccttgctcgtgccactcaagtctttgtcaagagacaaccagagattcacctt
tttgctgctcgattgcgggagcaacgtggtgatatacctggtgctcaggctgcgtatcaa
cttgtgcatgctgaaatatcacctggacttgtagaagcaataatcaagcatgcgaacatg
gaacgtcgacttgggaaccttgaggatgcctgttccgtatatgaacaagctatcgccatt
gaaaaaggaaaggagcactcgctgagtctgccattattgcttgcacagtactctcggttt
ttgtacttggtttctgggaaggtggaaaaagctcgggaaattcttgatcaagcagttgag
aatgtccagttgtcaaaaccacttctggaggcactgatccatttagaatccattcagtcg
ctaccaaagagaatagatttgttggattcattggttgataagttcatagttccatctccc
gagaaccctagcgttgcaagtgttgatgaaagagaggaattatcaagcattttcttggag
tttctagatcttttcggagatgcagcatcaattaagaaggctgatgatcggcacgctaag
ctttttttacgccatagaacctcttcagattcaaagaaacgtcaggctgacgattattta
gtttctgagaagacaaagctggcaaagtctgcagttgcagcatctaacccctcagtggct
ggtgcatttcctggagcgcaaaatcaatggcctgcaggttatggtgtacaaggtcaaacc
tggccacaggctgcgcaagcccaaccgcagcagtggaatcctggttatgcgcaacaggca
gcatatggtgcttacagcagttacggcgccagctatgcacctcctcaagcgcctgcacca
gtgccctcgagtgccggttatggtgcttatccttcaacatacccggcgcaggccttccct
cagcagaattatgcacagccagccgccgctcccactttgcctccagcaccacaagctaca
actgttcctcctacagcttattatggcagttattattga
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integrated database retrieval system
