Nicotiana tabacum (common tobacco): 107790313
Help
Entry
107790313 CDS
T04643
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107790313
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107790313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
107790313
NCBI-ProteinID:
XP_016467717
UniProt:
A0A1S3ZTM1
LinkDB
All DBs
Position
Un
AA seq
639 aa
AA seq
DB search
MTAPGVQLHLPDDHHVVMDNGILQVTLSVPAGIVTRIKYNGVDNLLEILNDETNRGYWDV
VWSPAGTTGTTGTFERLICTTYKVILETDDQIELSFSREWDVSLQDKLIPLNIDKRFIML
KGSSGFYSYAIYEHLEGWPGFNLDETRIAFKLRKDKFHYMAMADNRQRYMPLPDDRLPDR
GQPLAYPEAVLLVNPVEPEFKGEVDDKYQYSCEDKDLKVHGWICMDPPLGFWIIIPSDEF
RSGGPLKQNLTSHVGPTALSMFLSAHYAGEDLVAKFGEGEPWKKVFGPVFIYLNYVNEGE
DPLILWEDAKEQMLVEVQSWPYSFPASEDFPSSSQRGNISGRLLVQDRYFKDDKISASGA
YVGLAPPGEVGSWQRECKDYQFWIKADEEGYYIISDIRAGNYNLYAFVPGFIGDYKSDIT
VTITSGCSIEIDDLVFEPPRNGPTLWEIGIPDRSAREFYIPDPDPKYINKLFVNHPDKFR
QYGLWERYSDLYPNGDIVFTVGESDYKKDWFFAQVTRKRDEKTYIGTTWQIKFKLDSVKQ
KEIYTLRVALASAAQAELQVRLNDSSTNTPLFSSGVIGKDNAIARHGIHGLHWLFNVNLQ
GNILVEGENTIYLTQANATSPFQGIMYDYIRLEGPPSHD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcccggagtacagctgcacctccccgatgatcaccatgtggtgatggataat
ggtattctccaagtgacattatcagtaccagctggcattgtaaccagaatcaaatacaat
ggcgttgataatttgcttgagattctaaatgatgaaacaaacagaggatactgggacgtt
gtctggagtccagcaggaactacagggactacaggaacatttgaaaggctcatatgcaca
acctataaggtcatattggaaacagatgatcaaatagagctttccttctcaagggaatgg
gatgtgtcacttcaggacaagcttattcccctgaacatagacaaaaggtttataatgctt
aaaggttcttcaggtttctattcttatgcaatttatgaacatttagagggatggcctggt
ttcaaccttgatgagactaggattgcattcaagctcagaaaagacaagtttcattacatg
gcaatggcagataacaggcagagatacatgcccttacctgatgacaggttaccagataga
ggacaaccacttgcttatcctgaagcagtcctgcttgtcaatcccgtggagcctgagttc
aaaggcgaggtggatgacaagtatcagtactcatgtgaggataaagatctcaaggtccat
ggctggatttgtatggatccaccactagggttctggattatcattcccagtgacgaattt
cgatccgggggaccccttaaacaaaacctcacttctcatgttggtccaactgctctttct
atgtttctcagtgcccactatgcaggagaggatttggttgcaaagtttggagaaggagag
ccatggaaaaaagtctttggaccagtttttatatatcttaattatgtcaatgaaggggag
gatccccttattctctgggaggatgccaaagaacagatgctggtagaagttcaaagctgg
ccttacagttttccagcatctgaggattttccatcatcatcgcaacgcggtaatattagt
ggaagattgttagtccaagacaggtacttcaaagatgataagatatctgcttctggtgca
tatgttggcttagctccaccaggggaagtcggttcttggcaaagagaatgcaaggactat
caattctggataaaagcagatgaggaaggctattatataatcagtgatatacgagcaggc
aactataacttgtatgcatttgtccctggatttattggagattacaaaagtgatattaca
gttacaattacctcgggttgcagcattgagatagatgatcttgtctttgaacccccaaga
aatggacctacactttgggaaattggcattcctgatcgttctgctcgagagttttatatt
cctgatcctgatccaaaatatatcaacaaactctttgttaatcatcctgataagtttaga
cagtacgggctatgggagagatacagtgacttgtatccaaacggtgatatagtttttact
gttggagagagtgactacaaaaaagattggttctttgctcaagtcactaggaaaagggat
gagaagacatatataggaacaacatggcaaataaagttcaaacttgacagtgttaaacaa
aaggaaatctatacactaagagtggcacttgcatctgcagctcaagctgaattacaggtt
cgccttaatgattcaagcacgaatactcctctattctcaagtggagtgatagggaaggat
aacgcgatagcaaggcatggaattcatggtctccattggctgttcaatgtgaatttgcag
ggtaatatacttgttgaaggggaaaataccatatatttgacccaagcaaatgcaactagt
ccttttcaagggatcatgtatgattatatccgtttagaaggacctccttcccatgactaa
DBGET
integrated database retrieval system
