KEGG   Nicotiana tabacum (common tobacco): 107790528
Entry
107790528         CDS       T04643                                 
Name
(RefSeq) splicing factor U2af large subunit B-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107790528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107790528
Spliceosome [BR:nta03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107790528
 Complex B
    107790528
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 107790528
NCBI-ProteinID: XP_016467947
UniProt: A0A1S3ZUA6
LinkDB
Position
Un
AA seq 583 aa
MPDYEGNGEDIDNYAGGSSLPPKSRSSHGPTPDDYSDSKSQHSSRENEKNRDSSRSREKD
RERGRDKDRDRDRDRDRGRDRDRDRDKDRDREREKDRDRHHRDRHRDRSDRREKERTRDR
DDDDRHRTRDYDQQREHDKDRESRHRHRSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPP
TSAMLPGITAAAGQVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQATRHARRVY
VGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNA
MALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIF
VGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNG
IKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPATLATKVLSLTEVVSA
DELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSASKA
RQSLNGRKFGGNQVVAVFYPENKFYEGDYDAARISLGKNVPMD
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgccggactatgaaggcaatggagaagacatagacaattacgccggcggctcttctctg
cctcccaaatccagaagcagccatggtcctaccccggacgattacagcgactccaagtct
cagcatagttctcgtgagaacgaaaaaaatagggattcatcaagaagcagggaaaaggat
agggagagagggcgtgataaggaccgggacagggacagggatagggatagaggcagagat
cgggacagggatagggacaaggacagggatagagagagggagaaggaccgtgatcgtcat
cacagagaccgccatagggatcggagcgacagaagggagaaggagaggaccagagataga
gatgatgatgatcgtcaccgaactcgagattatgaccagcaaagagaacacgacaaagat
agagagagtcggcatagacataggtctcgctcaaggggtagatctgagcacagatcaagg
tctcgatcgcgttctcgatccaagagcaaaaggatcagtggttttgatatggcacctcct
acctctgcaatgttacctggcattacggctgctgcaggtcaagttcctgggaccaaccca
ccaattcctggaatgtttcctaacatgtttcctttagcatcgggccagtttggagctctt
cctgttatgccgatccaggcaatgacacagcaggctaccaggcatgctcggcgagtttat
gttggtggacttccggctcatgcaaatgaacagtctgttgcgaccttctttagtcatgtt
atgtctgcaattggaggaaacacagctggtccaggggatgctgttgtcaatgtctatata
aactatgaaaagaagtttgcttttgttgaaatgagatcagtagaggaagctagtaatgcc
atggcattggatggcattatatttgagggcgcaccctgtaaggtcagaagaccgagtgat
tacaatccttctctggctgctactcttggtcctagccaaccaaacccaaacctcaacctg
gcagctgttggattgagcccaggttctgctggagggctggaaggtcctgatcgtattttt
gttggtggtttgccctactatttcacagaagcacagattagagagctgttagagtctttt
ggtccacttagaggatttgatttggtcaaagatagagaaactgggaactcaaaaggctat
gccttctgtgtctatcaggatgtctctgttactgatattgcttgtgcagctcttaatggg
attaagatgggtgataaaacccttactgttaggcgtgctaaccagggtacaacacaacct
aaacccgagcaagagagtgtattgttgcatgcacaacagcagatagctttgcagagactc
atgttacaacctgctacattagccacaaaggtcctgagcttaacagaagtcgttagtgca
gatgagctcaatgacgatgaggactatcaagatattttggaagacatgagaactgaatgt
gggaaatttggatctctggtgaatgttgttattccacgtccaagtcctaatggcgagccc
acaccaggggttggaaaggtatttttggagtatgcggatgtcgacagtgccagcaaagct
aggcaaagtttgaatggaagaaaatttggtggcaaccaagttgttgctgtcttctatcca
gaaaacaagttctacgagggggactatgatgcggctagaatcagtcttggaaagaatgtt
ccaatggattag

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