Nicotiana tabacum (common tobacco): 107790661 Help Entry 107790661         CDS       T04643                                  Name (RefSeq) uncharacterized LOC107790661   KO K19525   vacuolar protein sorting-associated protein 13A/C Organism nta  Nicotiana tabacum (common tobacco) Brite KEGG Orthology (KO) [BR:nta00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nta04131]     107790661 Membrane trafficking [BR:nta04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     107790661 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps62 VPS13_VAB VPS13_C VPS13_M Pex24p C2 Pyridoxal_deC Motif Other DBs NCBI-GeneID:  107790661 NCBI-ProteinID:  XP_016468101 UniProt:  A0A1S3ZUM5 LinkDB All DBs Position Un AA seq 3079 aa AA seqDB search MGRLGIARETICPEESSPKNGRKVAHATLELRRKIFFGQLQYRQRFSLGFGRRTVTTLVL EFCSFNVDDEDYMGYDYSIIGQLSEVRIVYLNRFIQEIVSYFMGLVPNSSNDVVRINDQV TNSEKWFTRSEVEGSPALKLDLSLRKPIILMPRRTDSLDYLKLDVVHITVQNRFQWFCGS KSEMNAVHMEILTISVKDINLNVGAGSELGESIVQDVNGISIVIQRSLRDLLHQIPSIEV AIKVEELKAALSSREYEIIAECAQENLSETPNVVPPLIDDASSSSAVKTQHLSVRNSDAV KSEAEDKDKWIVTKVSIAIDLVELGLHYGLTRDASLATMQVSGLWLLYKSNTAGEGFLSS TLEDFTVMDNREGIEQELRLAIRKPETIWYNPSQSVTDAGEYAGMAFSTSSDKDMKLVPS MVILDARFYENLTSFSLFIQRPQLLVALDFLLAVVEFFVPNVRSMLANDDHGSSANAVDA VILNDSVYNQPSAELSLSPQKPLVADDESYDFFTYDGRGGTLFLQDRRGQNLSSPSEEAV IYVGSGKKLQFKNVKIKNGKYLDSCVLLGSNSSYSASEDDGVFFDEASCEGPSEDDSGVT VDAVPSQNTNVSRSAEFIFELKAIGPELTFYNTSRSVGESASLSNKLLHTQLDAFCRIVL KGDTFDVNANVLGLTMESNGVRIVEPFDTSVKFSNASGKSNIQLAVSDIFMNFSFSILRL FLEVEDDILAFLRTTSKKMTVVCSEFDKIGTIKSPSNQIYAFWRARAPPGYATVGDYLTP TDKPPTKGIIAVNTSFVRVKRPESFLLIWPSSSYKDGELCTTTCLSEEDSTCSIWFPKAP KGYVAVGCVVSPGRMQPPISSAWCILASLVSPCDLRDCVNIDIMSRSSNLAFWRVDNSIG TFLPSDPTTLELCGRAYDLRHIFFGLPRDFSETSKSSETRASSSRNHAVQSERSSTVNSG RRSEAIATFRLVWWNQGSGSRKKLSIWRPIIPQGKVYFGDIAVQGYEPPNTCIVLHDCDE LYQAPSDFKLVGQMKKHRSVDSISFWMPQPPPGFVSLGCIACKGAPKQSDFDSLRCIRSD IVASDQFSEQSIWDTSDAKFMKEPFSLWVIGDESGTFIVRSGFKKPPKRLALKIADRDMA SGPDDMVVDAEIRTFSAALFDDYGGLMVPLCNVSFSGITFNLHQRSDYLNSSATFSLAAR SYNDKYDSWEPLLEPVDGLLRYQYDVNAPGAASQLRLASTGDLNLNISVCNANTIFQAYA SWNNLSNVKESYQDAVAPIGGSRSIIDVHHRRNYFIIPQNKLGQDIFIRATEIRGLPSIT KMPSGDSKPIKVPVAKNMLDSHLNGSLFEKGKSMLTIIIAEAEFQQVEGLSSHEYAVEVR LAPDESHPCQSLSTQQSARTRGNNSYGSISSDVISVKWNEVFFFKVDSPDFFILELVVMD MGRGDIVGYSSAPLNHISRPQENPVSYNSSLELNWLALSSSRSMMMTSEGKEMNSSGRIK LAVYLSPQLEVEKSGKSFNTRTKSGFIQISPTREGPWTAVRLNYAAPAACWRLGNTVVAS EVSIADGNRYVNIRSLVSVRNYTEFTLDLQLMLSALNEKKRPDDDERKKVYGDEIVTDEF FETQKYNRDIGWFDVNEGRNEVEVPSGWEWVDEWHVDKNSVNTADGWVYAPDFNSLKWPE SSNPLKSVNYARQRRWLRNRQGKPRDPQAHIYVGPVRPGEVVPLPLSVLTHSGLYALQVR PSNLEKTEEYSWSSVMDMSGNTQDLGMPAENSGISVSILSESEKLLYCPVVSGTSSNSNR GMWFCLSIQATEIAKDMHSDPIQDWTLVIRPPLAITNYLPLTAEYSVLEMQVDGHFLTCD RGVFCPGESVKFYNANIRNPLYFSLLPQRGWLPLHEAILISHPKKAPSKTINLRSSISGR IVQVIAEHVHTHERPLQAKITKVYAPFWLSVGRCPPITFRLIDLSGRTTKKIAFPLLSKR NNELVLEEISEEEIYEGNTIAPVLNFKLLGLSASINMSSEESFGPVKDLSPLGDMDGSLD FCAYSADGNCMRLFVSSKPCPYQTVPTKVITVRPFVTFTNRLGQDIFLKLSSEDEPKVLR ASDARVSFIYRDTGGPDELQVRLDDTNWSFPIQIVKEDTVLLVLRRNDGTRRFLKMEIRG FEEGSRFIVVFRLGSTRGPIRIENRTRRMVIRLHQSGFGNDAWIQLLPLSTTNFSWENPY GQKLIDAEIYSGDSSMVWKFDLEKSGFCSECDGSGLLFHVIDMADVRVARFIDEGAALLI SKEGNMSLAEVGNLGSSHIQNQMQENGSPLEITVELGAIGVSFVDHRPRELSYLYLDRVF ISYSTGYDGGTTSRFKLILGFLQLDNQLPLTLMPVLLAPEQNIDVHHPVFKMTFTVRNEN IDGVQVYPYVYVRVTDKCWRLNIHEPIIWAFVDFYNNLQLDRLPNSSSVSQVDPEIRVDL IDISELRLKVSLESAPAQRPDGVLGVWGPVLSAVGNAFKIQIHLRKVIRRDRFMRKSSVI SAVGNRIWRDLIHNPLHLIFSVDVLGMTSSTLASLSKGFAQLSTDGQFLQLRSKQVWSRR ITGVGEGIRQGTEALAQGVAFGVSGVVTRPVESARQDGLLGFAHGLGRAVVGFVAQPVSG ALDFFSLTVDGIGASCSRCIEILSNKTTFHRIRNPRAIHADNILRDYSEREALGQVILHL AEESRHFGCTELFKEPSKFALSDYYENHFMVPYQRIVLVTNKRVMLLQCVSADKMDMKPC KIMWDVPWEELMALELAKAGYPRPSHLIIHIKKFRRSQKFVRVIKCNTEEETEVPQAVRI CSVVRKIWKAHQTDVACLQLKVPSSQRHVSFASNDNDGRDSFSQKKAIIESRELASWGAV SDRRKFVQHAITFSKVWSSERELKGRCTLCRKNVSEDGGICSIWRPSCLPDGYISIGDIT RVGCHPPNVSAVYRYSDKLFALPVGYDLVWRNCSDDYTNPVSIWHPRAPEGFVSPGCVAV PDFAEPEPNAAYCVAETLAEETVFEEQKIWTAPDSYPWACHIYQVRSDALHFVALRQPRE ESDWKPMRVIDDPQLHIEL NT seq 9240 nt NT seq  +upstreamnt  +downstreamnt atgggtaggctcggaattgcaagggaaacaatctgtcctgaagagtcgtcgccaaaaaat ggccggaaggtggcccacgcaacgttggaacttcgccggaaaattttctttggacagcta cagtatcgccagagattttcactgggatttggtcgccggacagtgactactcttgtgcta gaattttgttcattcaatgttgatgatgaagactacatgggttatgattacagcattata ggccagctgtctgaagtgcggattgtttatttgaatcgctttatccaagagattgtcagt tacttcatgggtcttgttccaaacagttctaatgatgttgtcagaataaacgatcaagtt acaaactcggagaagtggtttacaagaagtgaggttgaaggatcgcctgctttaaagctg gatctttctctaagaaagcctataattttaatgcctcgaaggactgatagccttgattat ttgaagctcgatgttgttcatatcactgtccaaaacaggtttcagtggttttgtggtagc aaaagtgaaatgaatgccgtacacatggaaatattaacaatctctgtcaaggacatcaat ttaaatgtgggtgctggctcagaattgggtgaaagtatagtccaagatgtcaatggaatt tcaattgttatacagcgatcgctgagggacctattgcatcaaatccctagcatcgaagtt gctatcaaggttgaagaattaaaagctgctctatcaagcagggagtatgagataattgca gaatgtgcgcaggaaaatctttcagagactcctaatgttgtgcctcctctaatagatgac gcctcatcatcttcagctgtcaagacacaacatttatcagtgagaaattctgatgctgtt aaatctgaagctgaagataaagataagtggattgtaaccaaggtctctattgctattgat ctggttgagcttggtcttcactatggattgacaagggatgcatcgcttgccacgatgcag gtaagtggtctgtggcttctctacaaatccaatacagcaggagaaggctttctgtcttcg acactcgaagatttcactgtgatggataatcgtgaaggtatagaacaggaactcaggttg gcaattcggaagcctgaaacaatttggtacaatccttcacagtcagtgactgatgctggt gaatatgctggcatggccttcagtacaagtagtgacaaggacatgaaactcgtaccttca atggttattcttgatgcaagattctatgaaaatttgacatctttttctctcttcattcaa aggccacaactgctagttgcacttgattttctgcttgctgttgttgagttctttgtacca aatgttcgaagtatgctggcaaacgatgaccatggaagttctgctaatgctgtagatgct gttattcttaatgactcagtttacaatcagccttctgctgaactctcactttctcctcag aaacctttggttgccgatgatgaaagttatgactttttcacatatgatggcagaggtgga actttgtttttgcaagataggagaggacaaaatctctcttctccgagtgaagaggctgta atttatgttggaagtggaaagaagttgcaatttaagaatgttaagatcaagaatggaaaa tatttggattcatgcgttttacttggatccaatagcagctattctgcttcagaggatgat ggagtcttctttgatgaagcttcatgtgaaggaccatcagaagatgattctggagtgacc gtagatgctgtgccatctcagaatactaatgtcagcagatctgcagagtttatatttgag ctgaaggctattggtccagagcttaccttctataatacatcaagaagtgtgggagagtct gcttccctttcgaacaaattattgcacacgcagttggacgccttctgcaggattgtttta aaaggcgatacctttgatgtgaatgcaaatgttcttggattaactatggagagcaatgga gttagaatagtggaaccttttgatacctctgtgaagttctctaatgcttccggaaagtca aatatacagttggctgtctccgatatttttatgaacttttcattcagcatcttaagactg tttttggaagttgaggacgatattttggcatttttgaggaccacatcaaagaaaatgacg gtggtgtgctccgagtttgacaaaattgggacaatcaaaagtccgtctaaccagatatat gctttctggagagctcgtgctccgcctggttatgcaacagttggtgactatctgacacca accgacaagccacccacaaaaggaatcatcgctgtgaataccagctttgtcagagtaaag aggccagagtctttcttgcttatttggccctcatcctcatacaaggatggtgaattgtgt acaaccacgtgtttatctgaagaagatagcacctgttccatttggttccctaaagcacct aaaggttatgttgcagtgggctgtgtagtctctcctggaaggatgcaacctccaatatcg tcagcctggtgcatcttagcctctttagtttcaccatgtgatctgagagattgtgttaat attgacattatgagtagatcttccaacttggcattctggcgcgtggataattccattggt accttcctgccttcagatccaactactttggagttgtgtggcagagcatatgatcttcgg catattttctttgggcttcccagagatttctctgaaacatcaaagagctcagaaactagg gcttcctctagtcgaaatcatgcagttcaatcagagaggtcatccactgtaaactctggt cgcaggtctgaagccattgcaacatttaggttagtttggtggaatcaaggttctggatct agaaagaaattatctatatggcgccctattattcctcaagggaaggtatattttggtgat attgcagttcaagggtatgagcctccaaatacttgtatcgtacttcatgattgtgatgag ctttaccaagccccttcagattttaagcttgtgggacagatgaagaaacatagatcagtt gatagtatatctttttggatgcctcagcctcctccaggctttgtgtccttgggttgtata gcttgtaaaggtgcaccaaagcaatctgattttgactccttaagatgcatccgcagtgat attgttgccagtgatcaattttcggaacaaagcatttgggatacatctgatgctaaattt atgaaggagccatttagtttatgggttattggagatgagtcaggaacctttattgttcgc agtggtttcaagaagcctccaaagaggcttgctttaaagattgctgatcgagatatggct agtggtccagatgatatggtggttgacgcagaaatcagaacattctctgcagccctcttt gatgattatggtggcttgatggttcctctatgtaatgtgtctttcagtggcataactttc aatctacatcaaaggtctgactatctgaattccagtgcgaccttctccttggccgctaga tcatacaatgataagtatgactcttgggagcctcttttggaaccagttgatggattattg aggtatcagtacgacgtgaatgctcctggtgcagcttcgcagcttcgtcttgcatctact ggggatttgaacttaaatatatctgtgtgtaatgccaacacaatatttcaggcttatgcc agctggaataatctgagcaatgtcaaggaatcctaccaggatgcagtcgcaccaattgga ggaagcaggtccatcattgatgttcatcacagaagaaattatttcattatcccacagaat aaacttggtcaggacattttcataagagctacggaaatcaggggcctacctagcataact aaaatgccgtctggagatagcaaaccaattaaagtacctgttgcaaagaatatgttggat tcacacttgaacggaagtctttttgaaaaaggcaaatccatgttgacaataataatagca gaggcagagttccaacaggttgaaggcttgtcttctcatgagtatgcagtagaagtccgt cttgctccagatgagagtcacccttgccaatctctgtccactcaacaaagtgcacgtact cgtggcaataactcatatggttctatatcttctgatgtaatctcagtgaaatggaatgaa gtatttttcttcaaagttgattcaccggattttttcattctggagcttgtcgtgatggat atgggaagaggtgatattgttggttattcatcagctcctctaaaccatatatctagaccc caggagaatccagtgtcttacaatagttcacttgaactcaattggctagcattgtcctct tcgcggtctatgatgatgactagtgaaggaaaagaaatgaattcatcaggaagaataaaa ttggctgtttacttgtctcctcaacttgaagttgaaaagagtgggaagtcctttaacact cggacaaaatctgggtttatccagattagtcctaccagggagggaccttggactgctgtg aggctgaattatgctgcacctgctgcttgttggcgactgggaaatactgttgttgccagt gaagtgagcatagctgatggaaatcgatatgtcaatattagatctctagtttcagttcgt aactacactgaatttacgctggatttacagctcatgctcagtgctttaaatgagaaaaaa agaccagatgatgatgagagaaaaaaggtttatggtgatgaaattgtgacagatgagttc tttgagacccaaaaatataatcgtgatattgggtggtttgacgttaatgaggggagaaat gaagttgaggttccatcaggctgggaatgggttgatgaatggcatgtagataagaattct gtgaacactgctgatggatgggtttatgctccagatttcaatagtttgaaatggccagag tcgtccaatccactaaaatctgtaaactatgcaagacagaggaggtggcttaggaatagg caaggcaagccgagagatccccaggctcatatttatgttgggcctgtaaggcctggtgaa gttgttcccttgcctttatctgtcctgacccattctggactttatgcactgcaagtgagg ccttcaaacctggaaaaaactgaagaatattcgtggagttctgtaatggacatgtctgga aacactcaggatcttgggatgccagcagaaaactctggaatatctgtatccattctcagt gagtctgagaaactcctatactgccctgtagttagtggaacctcatccaatagtaaccgg ggcatgtggttctgcttgagcatacaagcaacagagattgcaaaggacatgcactctgat cctattcaagattggaccctcgtgatcaggccaccacttgcgattaccaattatcttcct cttactgctgaatattctgttcttgagatgcaagtcgatggtcattttctcacttgcgat agaggggtattctgtcctggtgaatctgtcaagttttataatgccaacataaggaatcct ctgtacttttcgttgcttccgcaaagaggatggttgccattacatgaggctatactcata tcccatcctaagaaggcaccttcaaagacaataaatctaagaagctcaatttctggaagg attgttcaagtaattgctgaacatgtgcatacccatgaaaggcctctgcaagcaaagatc accaaggtctatgctcctttctggctttcagttggacgatgtccacctattactttcagg cttatcgatttgagtgggcggacaacaaagaagattgctttccctttgctatctaaaagg aataatgaacttgtcctggaggagatctctgaggaggaaatatatgaaggaaatacaatt gcgcctgttttaaacttcaagttattaggcctttcagcatcaattaacatgtctagtgag gagagttttggtcctgttaaagatctttctccgttgggtgacatggatggctcgctggat ttctgcgcctacagcgctgatggaaattgcatgcggctttttgtatcatcaaaaccttgc ccttatcaaactgttccaacaaaggttattactgttcgaccatttgttacatttaccaat agacttggtcaagacatatttttgaaattgagcagcgaagatgagccaaaggttttgcgt gcatctgatgccagagtctcatttatatatcgcgacacgggtggacctgatgaactccag gtccgactggatgatacaaattggtcatttcctattcaaattgttaaggaggacacagtt cttcttgtcttgaggagaaacgatggcacgcgaagatttttgaagatggaaattcgtggc tttgaggaggggtcacgtttcatagttgttttccgccttggatcaacaaggggtccaatt aggattgagaacaggacgaggaggatggtcattagacttcatcaatctggatttggcaat gatgcatggatccagctactgcctctttcaaccacaaacttttcatgggagaatccctat ggccaaaaacttattgatgctgagatttatagtggcgatagctctatggtctggaaattt gatttggagaagtcagggttctgttctgaatgtgatggatcaggcttgcttttccatgtt atagatatggctgatgtcagggttgctaggtttattgacgagggagcagcattattaatt tcaaaagaagggaacatgtctcttgcagaagttggaaatcttggcagttctcacatacag aaccagatgcaggagaatggatctcctctagaaattacagttgagttgggtgctattggg gtttcttttgtggaccatagacccagagagctatcctatttgtatctggacagagtcttc atatcctattctacgggatatgatggtggaaccacaagcaggtttaagcttatattgggg ttcttgcagcttgacaatcaactgcctctcacattgatgcctgtactgctggcacctgaa caaaacattgatgtacatcatccagtcttcaagatgacctttacagtgcgcaatgagaac attgatggtgtccaggtatacccttatgtttatgtaagggtaacagataaatgctggagg cttaacattcatgagccaataatttgggcttttgtagatttctacaacaatcttcaacta gatcgcctaccaaacagttctagtgtcagccaggttgatcctgaaatacgtgtagacttg attgatatatctgaactaaggctgaaggtttcattggagagtgcacctgctcagcgacca gatggggttctaggcgtttggggcccagtgctgtcggctgttggaaatgcctttaaaata cagatccatttaaggaaagtgatccgcagagacagatttatgagaaaaagctctgtcatt tctgcagtaggaaatcgtatttggagagatttaattcataaccctctgcacttaatattt tcagtggatgtattgggtatgacaagttcaactttagcctctctcagcaaaggctttgct caactatcaacagatggacagtttttgcagctgcgttcaaagcaggtatggtcaagaaga ataaccggagttggtgaagggatcaggcaagggactgaagccctagcacaaggtgttgca tttggagtttctggggtagtgacaaggcctgtggagagtgctagacaagatggccttctt ggctttgcccatgggcttggacgagctgttgtgggattcgttgctcaaccagtgagtgga gcattggacttcttttcattgactgtcgatgggattggtgcaagttgttctcgttgcata gaaattcttagtaacaagaccaccttccataggataagaaatccccgtgctattcatgca gacaatatacttagagattacagcgagcgagaagcactaggtcaagtgatactacatctt gctgaagaaagccgacattttggttgcactgaactttttaaagagccttctaaatttgcc ttgtctgattattatgaaaatcactttatggttccctatcagcggattgttttagtgact aataaacgtgtaatgctcctccagtgtgtgtctgctgataagatggacatgaagccctgt aaaatcatgtgggatgtaccttgggaagaactcatggcacttgaattagcaaaagctggc taccctagaccttctcacttgatcatccatatcaaaaaattccgaaggtctcagaagttt gtccgtgtaataaagtgcaacactgaagaagaaactgaggtgcctcaagctgtaagaatc tgttcggttgtgcgtaaaatatggaaagcacaccaaactgacgtggcatgtctgcagctg aaggttccttcaagccagaggcatgtatcctttgcttcaaatgataatgatggaagagat tcgtttagccagaaaaaggccataattgaatcaagggagctggcttcctggggtgctgtc tctgatagaagaaaatttgttcaacatgctatcacattttccaaggtatggagcagtgaa cgagagttgaaaggtcgttgtacattgtgccggaagaatgtttcagaagatggtggaatc tgtagtatttggcgcccttcctgtttacccgatgggtacatctcaattggggatattact cgtgttggttgtcatcctcctaatgtttcagctgtataccgttattctgacaagttgttc gccctcccagtcggttatgacctggtgtggaggaactgctcagatgactacaccaatccc gtatcaatttggcatcctcgtgctcctgagggctttgtatctccgggatgtgttgctgta cctgattttgctgagccggaaccaaatgctgcatactgtgtcgcagaaacattggccgag gagacagtatttgaagaacaaaagatctggacagcgccagattcatatccctgggcatgt catatctaccaggtgcgcagtgatgcacttcattttgttgctctcaggcagcccagagaa gaatcggattggaagccaatgagagttatcgatgacccacagcttcacattgagctctag

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