Nicotiana tabacum (common tobacco): 107791025
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Entry
107791025 CDS
T04643
Name
(RefSeq) ATP-dependent DNA helicase RecQ-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107791025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107791025
03400 DNA repair and recombination proteins [BR:
nta03400
]
107791025
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107791025
Messenger RNA biogenesis [BR:
nta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
107791025
DNA repair and recombination proteins [BR:
nta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
107791025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
HAD_2
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
107791025
NCBI-ProteinID:
XP_016468494
UniProt:
A0A1S3ZVZ3
LinkDB
All DBs
Position
Un
AA seq
911 aa
AA seq
DB search
MHSILKKYFGYTEFRPYQKEIIEKILDGKDCLVVMATGSGKSLCYQVPPLISEKTALVIS
PLISLMQDQVMALKQRGIKADYLSSAQTDRGVQTNAELGHYDVLYMTPEKACALPNSFWS
RLLKAGMCLLAVDEAHCISEWGHDFRVEYKQLDKLRNVLLNVPFVGLTATATEKVRSDIM
NSLQMKDPHVAIGSFDRKNLFYGVKSFSRSSQFVDQLVEEISKYVDNANSTIIYCTTVKD
TEEIFKSLHEAGIKAGIYHGQMANKAREEAHRSFIRDEFYVMVATVAFGMGIDKPNIRYV
IHYGCPKSLESYYQESGRCGRDGIPSVCWLYYTRSDFAKADFYSAEARSAAQRKAIMEAF
SAAQHYCMLSTCRRKYLLDYFADEYAHDDCGNCDICTSSMKEKDLSREAFLLMACIQSCG
GRWGLNLPISILRGSRTKKIVDAQFDKLPFHGLGKELSANWWKGLAYQLISRDYLVETFK
DMYKTVSVSEKGLQFLRSSSPDHQPPLFLPETPEMDLDEKNRDTPNEVSEIDGLASKELG
VSQAETQLYKMLIEERIKLARATGTAPYAVCGDQTLKRISLTRPSTKARLANIDGVNQHF
IKLYGDNFLQSIKRLSEACNLSLDGDSSSQTSVPSKIVTVPSSKKLTPAKFEAWKMWHED
GLTFKEIANFPGRAAAIKEQTVLEYILEAAREGYKMNWTRFCEETGLTRETFLSIQNAVS
KVGKEKLKPIKTELPEEVSYGQIKAYLTMQEAGVSAEVFSSNYEQSCNGDECLNEISEIL
QNIPSDVQGDDGLVEAPVVTGTRGASPGKTEGAESHLLTETNRKEAASSEGDLLIPTKRQ
RVEAAEVKSFRTLDATEESILSWLKNFDDGVALSDLLEHFNGVTEKSLFDLLSYLEGEFL
IYRKNNLYKLM
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgattcttaagaaatattttgggtacacagagtttcgaccttatcagaaggag
attatagagaaaattttagatggaaaggactgtttggtggtaatggccaccggtagtggc
aagtcactgtgctatcaggttcccccattgatctccgaaaagactgctttagttataagt
cctctcatttctttgatgcaagatcaggtgatggcattgaaacaaagggggattaaagct
gactatctttcaagtgctcagactgatcgtggggtgcagacaaatgctgagttgggtcac
tatgacgttctgtatatgactccggaaaaggcttgtgcgcttcctaacagtttctggtca
agattgttgaaagctgggatgtgtctgttggctgttgatgaagcacactgcatttcagaa
tggggtcacgatttcagggtggagtataaacagttagacaagctgcgtaatgttcttttg
aatgttccatttgttggcttaacagcaactgctacagaaaaagttcggagtgacattatg
aactccttgcagatgaaagaccctcatgttgctattggctcatttgatcgcaaaaatctt
ttctatggagtcaaatcttttagtcgtagttctcaatttgttgatcagctggtggaggag
atctctaaatatgtggataacgcaaattcaacaataatatattgtacaactgtcaaagac
actgaagagatcttcaaatcacttcatgaggcaggaatcaaagccggaatctaccatggg
caaatggctaataaagcacgtgaggaggctcataggtcatttatcagagatgaattctat
gtcatggttgcaactgttgcttttggcatgggtatagataaaccaaacataaggtatgtg
atacactacggctgcccaaagagtctggagtcttactaccaggaaagtggacgatgcggc
agagatggtattccttcagtttgctggctttactacacaagaagtgacttcgcaaaagct
gatttctactctgcagaagctcgttcagcagctcaaagaaaagctattatggaagcattt
tctgctgcacaacattactgcatgctgtcaacttgtagacgaaaatatttgttggattac
tttgcggatgagtatgcccatgatgattgtggtaactgtgatatttgcactagctcaatg
aaggaaaaggacttgtcccgagaagcatttcttcttatggcctgtattcagtcatgtgga
ggccgttggggcttgaatctgcccataagcattcttcgtggatctcgaaccaagaaaatt
gttgacgctcagtttgataagcttccatttcatggtcttgggaaggagttatctgcaaat
tggtggaagggactggcttaccaattgatttcacgtgattatttggtagaaaccttcaaa
gatatgtacaaaactgtgagtgtcagtgaaaagggtttgcagtttctaagatcaagtagc
cctgatcatcaacctccactgtttttgccggagactcctgaaatggatcttgatgagaaa
aatagagatacacccaatgaagtgagtgaaatcgatggcttggcttcaaaggaacttgga
gtttcacaagctgaaacgcaattgtacaaaatgcttatagaagagagaattaagcttgcc
agagctactggaactgctccgtatgcagtctgtggagaccaaacattgaaaaggataagc
ttgaccaggccttctacaaaagcaagactagctaatatagatggtgtaaaccagcatttc
ataaaactgtatggggataattttcttcaaagcattaagcgtctatcagaagcttgcaat
ctttctttggatggggattcaagcagtcaaacctctgttcccagtaagattgtcacggtt
ccaagcagtaaaaaattaacaccagcaaaatttgaagcatggaagatgtggcatgaggat
ggtcttacgttcaaagaaattgctaattttcctggtagagcagcagcgataaaggaacaa
actgtgctagagtatatactcgaagctgcacgagagggatacaaaatgaattggaccagg
ttttgtgaggagactgggctgacaagagagacattcttgagcatccagaatgctgtctca
aaagttggtaaggaaaaattgaagcccatcaaaactgagttaccagaagaggtaagttat
ggtcagataaaggcatacttgacgatgcaagaggcaggagtatcagctgaagtattttca
tccaattatgagcaaagttgcaatggagatgaatgtttgaatgaaatatcagaaatacta
cagaacattccatctgacgtgcagggagatgatggcttagttgaagcacctgttgtcact
ggtacaaggggtgcttctcctgggaagactgaaggagcagaatctcatctcctgactgag
acgaacaggaaagaagctgcatccagtgaaggtgatttgctcattcctacaaaacgccaa
agggtcgaagcagcagaagtcaaaagttttaggactctggatgccacagaagaatccata
ttgagctggctcaagaactttgatgatggggtcgccctttctgatcttttggagcacttc
aacggggtcactgaaaaatctttattcgatctgcttagttaccttgaaggtgagtttttg
atatataggaagaacaacctatacaagcttatgtaa
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