Nicotiana tabacum (common tobacco): 107791573
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Entry
107791573 CDS
T04643
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107791573
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107791573
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107791573
NCBI-ProteinID:
XP_016469148
UniProt:
A0A1S3ZXS4
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Position
Un
AA seq
397 aa
AA seq
DB search
MDAYRAKISVFFLLVLFTFAALATATNIPRRQLGNKKYKGPCRAENAIDKCWRCDPNWAE
NRQKMADCALGFGSNAIGGKLGRIYVVTDPSDDDVVDPKPGTLRYGVIQKEPLWIIFGKN
MKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQCASNIIISNLRIHNIVPTPGGLLRE
SEDHVGLRSGDEGDGISIFDSRDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEK
VMLFGANDNYVLDKDMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSS
GATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTWISDGDDMENGATFTPSGDQN
LLDKIDHLNLIKPEPSSKVGILTKFSGALSCVKGRPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctacagagcaaaaattagtgtattttttctccttgtgttattcacatttgct
gcattagcgacagcaacaaacatcccaagaaggcaacttggtaacaagaaatacaaaggc
ccatgccgggccgaaaatgcaatcgacaaatgctggcgatgcgacccaaattgggccgag
aatcgccagaaaatggccgattgcgcattgggttttggcagcaatgcgatcggaggaaag
ttgggcagaatctacgtcgtcacagacccttctgacgacgatgttgtcgatcctaagccc
ggaactctccgatatggtgttatccaaaaggagccattgtggatcatatttggcaaaaac
atgaaaattaaacttagtagggaacttatcgtgactagcaacaaaacaatcgacggccgt
ggatttaatgtccatatacaaaatggagctggcattaagatacaatgtgcatccaatatt
attatttctaatctccgcattcacaatattgtacccaccccaggtggcctgctcagggag
tccgaggaccacgttggcctaaggagtggcgatgaaggtgatggcatcagcatcttcgat
tcgcgtgatatatggatcgaccacatctctatgtctcgtgcaaccgatggtcttatcgat
gctgttgctgcttccactaacattaccatatccaattgccacttcactgaccacgaaaag
gtaatgttgttcggcgccaacgataattacgtgcttgacaaggacatgaaaattacatta
gcgtacaaccactttggaaagaggttggatcaaaggatgcctagatgcaggtttggattt
ttccatctggtgaacaatgactacactcattgggaaaggtacgctattgggggaagcagt
ggagccaccatcattagtcagggtaatcgatttattgctgaggacgaattgttggtgaaa
gaggtaacatatagggaaaaacttacggcgagtgtggcggaatggatgaaatggacatgg
atatcagatggtgatgatatggaaaatggtgcgacatttacaccatctggtgaccagaat
ttactcgataaaattgaccatctcaatctcattaaaccagaaccttcttccaaagttgga
attcttactaagttttcaggtgctctgtcttgcgtcaaaggacgcccatgctaa
DBGET
integrated database retrieval system