Nicotiana tabacum (common tobacco): 107791617
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Entry
107791617 CDS
T04643
Symbol
CHC2
Name
(RefSeq) clathrin heavy chain 2-like
KO
K04646
clathrin heavy chain
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04142
Lysosome
nta04144
Endocytosis
nta05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107791617 (CHC2)
04142 Lysosome
107791617 (CHC2)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107791617 (CHC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107791617 (CHC2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nta04147
]
107791617 (CHC2)
Membrane trafficking [BR:
nta04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107791617 (CHC2)
Exosome [BR:
nta04147
]
Exosomal proteins
Proteins found in most exosomes
107791617 (CHC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Totivirus_coat
TPR_Vps41
IcmW
Motif
Other DBs
NCBI-GeneID:
107791617
NCBI-ProteinID:
XP_016469196
UniProt:
A0A1S3ZY26
LinkDB
All DBs
Position
Un
AA seq
1705 aa
AA seq
DB search
MAAANAPITMKEALTLQSIGVNPQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTSQDHLQIFNIEAKQKMKSYQMPEQVVFWKWI
TTKMLGLVTQTSVYHWPIEGDSEPVKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAAAFATFRVPGNDRDSVLISFATKSSNAGQVTS
KLHVIELGAQPGKPAFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSIGGFYAINRRGQVLLATVNEATLVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKGGLYMRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLVINIKGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRIVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWETVLNPENEFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRDINRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATHFLDVIHAAEDADVYHDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLGDI
EEFILMPNVANLPNVGDKLFDEGLYEAAKIIFAFISNWAKLASTLVKLNQFQGAVDAARK
ANSAKTWKDVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPDAWDHMQFKDIVVKVANVELYYKAVHFYLKEHPDLINDMLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESTDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQSEAKAKENEEKDVIKQQNMYAQLLPLALPAPPMPGMGGAGMGGGF
APPPPMGGMGMPPMPPFGMPPMGSY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctaacgctccgatcaccatgaaagaggccctcacgttgcaaagtattggg
gtgaacccgcagttcatcacgttcacgaatgttaccatggaatcggataagtatatatgt
gtaagagagacggcccctcagaatagtgtggtgattattgatatgaacatgccaatgcaa
cctttgaggcgtccaattaccgctgattctgctcttatgaatcctaattctagaattttg
gctctaaaagctcaagtcccgggaactagtcaagatcacttgcagattttcaatattgag
gcaaagcagaaaatgaaatcatatcagatgcctgagcaggttgttttctggaagtggatt
acaacgaagatgttaggtcttgttactcaaacgtcagtctatcattggccaattgaaggg
gattctgagcctgtaaagatgtttgatagaacagccaatttagccaacaaccaaataatt
aactaccgatgtgatccttcagagaaatggttggttttgattggtatcgcgccaggttca
ccagagaggccccaactagtcaaaggaaacatgcaattattttcagtagatcagcaacgc
agtcaagctctcgaggcacatgctgcagcatttgccacattcagggttcctggaaatgat
agggattccgtacttatttcttttgccacaaaatcctcgaatgctggacaagtcacatca
aagttgcatgtcattgagcttggagcccagccagggaaaccagcttttacgaagaaacag
gcagatctattctttcctccagattttgctgatgatttcccagttgccatgcagatatct
cataaatacagtttaatttatgtcatcacaaagcttgggcttctctttgtctatgacctc
gaaacagctactgcagtatacaggaataggatcagcccggatcctatttttctgacagca
gaagcttcatctattggtggtttctatgccatcaacagacgaggtcaagtgttactggcc
acagtgaatgaagcaactctagtaccttttgtcagtggccaattgaataatctggagctt
gctgttaatcttgccaaaagaggaaaccttcctggagctgagaatttggttgtccagcgg
tttcaagagttgtttgcccagacaaaatacaaagaagctgctgagcttgcagcggaatca
ccacaaggcatactccgtacgcctgacactgttgccaaatttcagagtgttcccgttcaa
gcagggcaaacgcctccgctattgcagtactttgggacacttttaacaaaagggaagcta
aacgcttttgaatcattagaattgtcgcgccttgttgtcaaccagaacaagaaaaacctg
ttggagaactggttggccgaggataagctggagtgtagtgaggaacttggggatcttgtg
aagactgttgataatgaccttgccctgaaaatatatatcaaagcaagagcgactccgaaa
gttgttgctgcttttgctgagcgcagggagttcgataagattctgatatattccaagcag
gttggatatacacctgactacttgttccttcttcaaaccattctgcgatctgatcctcag
ggagctgttaactttgcgctcatgatgtcccaaatggagggcggttgtcctgttgattac
aacactatcaccgatctatttcttcagaggaacatgatccgtgaggcaacagcattttta
ctggatgttctgaaacctaaccttccagagcatggctttctgcagactaaggtcttggaa
atcaaccttgtgactttcccgaatgttgctgatgctatattagcaaatgggatgttcagt
cattatgatcgacctcggattgctcagctttgtgagaaaggtggtctttacatgcgggct
ctgcagcactattccgaactgcctgatatcaagcgtgttattgtgaatacacatgcaatt
gagcctcaggccttggttgagttctttgggactctttcacgtgaatgggcactggaatgc
atgaaagacctccttgttatcaatatcaaaggaaaccttcaaataattgttcaggttgca
aaagagtactgtgagcagttgggtgttgatgcttgcataaagctttttgagcaatttaag
tcttatgaggggttatatttcttccttggatcatatttgagttccagtgaggatcctgat
atccactttaaatatattgaggcagctgccagaactggacaaatcaaggaggttgagcgt
gtcacaagagaatcaaacttctatgatgcagaaaagacaaagaacttcttgatggaagcc
aaacttcctgatgctcggcctctgattaatgtttgtgaccgctttggttttgttcccgat
ctcacacactatctctataccaacaatatgctacggtatattgaaggttatgtccagaag
gtcaatccaggaaatgctcctttagttgtagggcagcttttagatgatgagtgtcctgag
gacttcattaagggattgatcctgtctgtgcgttctctgcttccagttgagcccttggtg
gaagaatgtgaaaaaaggaatcgactccgcttgctgacacagttcttggagcatcttgta
agtgaaggaagtcaagatgtgcatgtacacaatgctctaggaaagatcatcattgatagc
aataacaacccagagcatttcctcacaaccaatccatactatgactcgcgcattgtgggt
aaatattgtgagaagcgcgatcctacccttgctgttgttgcatataggagagggcaatgt
gatgatgaactcattaatgtgacaaacaagaactctttgttcaaacttcaagcgaggtat
gtggttgagaggatggatggtgatctttgggagacagttcttaaccccgaaaatgagttt
agaaggcagcttattgatcaagttgtttccactgctttgcctgaaagcaagagccctgag
caagtttctgcagctgttaaagctttcatgactgctgatcttcctcatgaactaattgag
cttcttgaaaagattgtgctccagaactctgcattcagtgggaactttaatttgcagaat
ttgcttatcctgacagccatcaaagccgatccatccagagtaatggactatatcaatagg
cttgataattttgatggacctgcagtaggggaggttgctgtagaagcccaactttacgaa
gaagcttttgctatattcaagaagttcaatctgaatgtccaggctgttaatgttctgctc
gacaacattcgtgatattaatcgggctgtggagtttgcattccgagttgaagaagatgct
gtttggagccaggtggctaaagctcaactgagagaaggattagtgagcgacgctattgag
tcatttattcgtgcagatgacgccacccactttttggatgtaattcatgctgcagaggat
gcagatgtttaccatgacttggttaagtatttgctgatggtaaggcaaaagacaaaagag
cccaaagttgatagtgaactcatttatgcatatgctaaaattgatcgattgggtgacatt
gaagaatttattctcatgccaaatgttgctaatctaccgaatgttggtgataagctgttt
gatgaaggcttatatgaggctgcaaagatcatattcgctttcatttctaactgggccaag
ttggcgagcacgcttgtgaagttaaatcaatttcaaggtgctgtcgatgcagcacgcaag
gcaaatagtgctaagacatggaaagatgtctgctttgcttgtgttgatgctgaggagttc
cgtttggctcaaatttgtgggcttaacattatcgttcaggtagatgacttggaggaagtt
agtgaatattaccaaaatagaggatgtttcaatgaattaatctctcttatggagagtggg
ctgggtttggagcgtgcacatatgggtatcttcacagaacttggtgttttgtatgccaga
taccgtcacgagaagctcatggaacacattaaattattctccaccagactcaacattccc
aagcttattcgtgcctgtgatgagcagcaacactggaaggaactcacatatttgtacatc
caatatgatgaatttgataatgctgccactactgtcatgaatcattctccagatgcctgg
gatcatatgcagttcaaagacattgttgtcaaagttgctaatgtggagctttattacaag
gccgttcacttctatttgaaagagcatccggatctcattaatgatatgctaaatgttctt
gcacttagagtggatcacacacgcgtagtggacataatgagaaaggctggtcaccttcgc
ctagtcaagccttacatgattgctgttcagagcaacaacgtttctgcagtgaatgaggcc
cttaacgaaatttatgttgaggaagaagactatgatagactacgtgaatcaactgatttg
catgataacttcgatcagattggccttgcacagaagatagagaaacatgagcttctcgag
atgcggcgtgttgctgcctatatctataagaaagctggtaggtggaagcaatccattgct
ctgtcaaagaaagataatctctacaaagatgccatggagacagcctcacaatctggagat
cgcgaacttgcagaggagttgcttgtttactttattgaacagggaaagaaagaatgcttc
gcatcatgcctgtttgtttgttacgatttgattcgcccagatgttgcccttgagcttgcc
tggatgaataatatgattgactttgcattcccttacctgttacagtttatccgtgaatac
actggcaaggttgatgagctaataaaagataagattgaggctcaaagtgaagcaaaagct
aaagagaatgaagagaaggatgttattaagcagcagaatatgtatgcacagctactgcca
ttggctttgcctgctccaccaatgccaggtatgggaggtgcaggcatgggaggtggtttt
gctcctcccccgcctatgggtggaatgggaatgcctcccatgcctccatttggcatgcca
cccatgggttcctactaa
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integrated database retrieval system