Nicotiana tabacum (common tobacco): 107791620
Help
Entry
107791620 CDS
T04643
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107791620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107791620
03009 Ribosome biogenesis [BR:
nta03009
]
107791620
04131 Membrane trafficking [BR:
nta04131
]
107791620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nta04147
]
107791620
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107791620
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107791620
Membrane trafficking [BR:
nta04131
]
SNARE
SNARE associated proteins
Others
107791620
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107791620
Exosome [BR:
nta04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107791620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
AAA_18
Parvo_NS1
ATPase_2
IstB_IS21
Viral_helicase1
ABC_tran
NACHT
AAA_7
NB-ARC
AAA_24
Vps4_C
TsaE
AAA_lid_PRS2_C
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
107791620
NCBI-ProteinID:
XP_016469198
UniProt:
A0A1S3ZXX3
LinkDB
All DBs
Position
Un
AA seq
806 aa
AA seq
DB search
MSHPAESSDSKNATKKDFSTAILERKKAANRLMVDEAVNDDNSVVALHPATMEKLQLFRG
DTILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRV
HILPIDDTIEGVTGDLFESFLKPYFLEAYRPLRKGDHFLVRGGMRSVEFKVIETDPGEYC
VVAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERIGKDTHGYVGADLAALC
TEAALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVS
WTDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGG
AADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQ
IFKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSE
NPDSMDEDVDDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFA
EASGGTAAADPFATSNAGGDDDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacccggccgagtcatctgactcaaaaaatgctactaagaaggatttttctacg
gcgattttggagcggaagaaagctgcgaatcggctcatggttgacgaggcggtcaacgat
gataactccgttgttgccttacaccctgctactatggagaaacttcagcttttccgtgga
gatacgattctcatcaagggaaaaaagagaaaggatacagtcgtcattgcccttgctgat
gaaacatgtgatgagccaaagattaggatgaacaaggtggtccgttcaaatttgagggtt
cgacttggagatgttgtatctgtgcaccagtgtccagatgttaagtatgggaagcgtgtc
cacatacttcctatagatgatacaatagaaggtgtcacaggggatctgtttgaatcattc
ctgaaaccctactttttggaggcatatcgtcctttgaggaaaggggaccatttccttgtt
agaggagggatgagaagtgtggaattcaaggtcatagaaactgaccctggggagtattgt
gtcgttgctccagacactgaaatcttttgtgagggtgagcctgtgaaaagggaggatgag
gatagacttgatgaagttggctatgatgatgttggtggtgtgagaaaacagatggctcag
attcgtgaactggtggaattaccattgaggcatcctcaacttttcaaatctattggtgtg
aaaccaccaaaggggattttactttatggacctcccggttctggaaagactctgatagcg
agagctgtcgctaatgaaacaggtgcatttttcttttgcattaatggtcctgaaataatg
tccaaattggctggagagagtgaaagtaatctcaggaaggcatttgaagaggctgaaaag
aatgctccttctatcatatttattgatgaaattgattcaattgctcccaaacgagagaag
acacatggtgaagttgaaaggaggattgtctcacaactcttgaccctgatggatggactg
aaatcgcgtgctcatgtaatagtgatgggagctaccaaccgtccgaacagcattgatcct
gctctaagaaggtttggtaggtttgatagagaaatagacatcggtgttccagatgaagtt
ggacgtcttgaagttcttcgcattcataccaaaaatatgaagcttgcagaagaagttgat
ttggaaagaattggaaaagatacacatggttatgttggtgcagatcttgctgctctttgc
actgaagctgcacttcagtgtattagggagaaaatggatgtcattgatctggaagatgat
actattgacgctgagatattgaactctatggctgtaacgaatgagcacttccaaactgct
cttggtacaagcaatccatctgcattgcgtgaaacagtggttgaagtgcctaatgtctcc
tggacagacattggaggccttgaaaatgtcaaacgagagcttcaagagactgttcaatat
ccggtggaacacccagagaagtttgaaaagtttggtatgtcgccttcgaaaggtgttctt
ttctatggtcccccagggtgtgggaaaactctacttgccaaggcaattgcaaatgaatgt
caagccaatttcatcagtgtcaaaggtcctgaactgctcactatgtggtttggggagagt
gaggcaaatgttagggaaatttttgataaagctagacaatctgcaccctgtgtcctcttc
tttgatgagcttgattctattgctactcagaggggaagcagtagtggagatgctggtgga
gcagctgatcgtgttctgaaccaacttctgactgaaatggatggcatgaacgcgaagaag
actgtatttataattggggccacgaacaggcctgatataatagaccctgcacttctacga
cctggccgtcttgaccagttaatctatattcctctgccggatgaagattcacgccatcag
attttcaaggcgtgtctgagaaagtctcccttatcaaaggatgttgatttgagagctctt
gccaaatatactcagggatttagtggggctgatatcactgagatctgtcagcgagcctgc
aaatatgccataagggagaacatagagaaagacatagaaagggagaggagaagaagtgag
aatcctgattctatggatgaggatgttgatgacgaagtaccggagatcaagcccgcgcat
tttgaggagtctatgaagtatgcacgacgaagtgttagtgacgctgatatacgtaaatac
caggcatttgctcagacattacagcagtctagaggttttggaacagaatttcggtttgct
gaggctagtggcggtactgctgcagctgacccgtttgcaacttctaatgctggaggtgat
gacgatgacctgtatagctga
DBGET
integrated database retrieval system
