Nicotiana tabacum (common tobacco): 107791833
Help
Entry
107791833 CDS
T04643
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107791833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107791833
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107791833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
107791833
NCBI-ProteinID:
XP_016469459
UniProt:
A0A1S3ZYQ3
LinkDB
All DBs
Position
Un
AA seq
581 aa
AA seq
DB search
MAYSFPEEVLEHVFSFLSSDEDRNSVSLVCKSWYEIERWCRRRIFVGNCYAVSPSIMIRR
FPEVRSVEFKGKPHFADFNLVPEGWGAYVHPWIVAMSRSYPWLEEIRLKRMVITDESLEL
ISKSFKNFKVLVLSSCDGFTTDGLASIAANCRNIRELDLGESEVEDLSGHWLSHFPDSCT
SLVSLNIACLASEISFLALERLVSRSPNLRTLRINRALPLEKLPNLLRRASQLFEFGTGA
YSAEVRSDVFSNLTEAFSCCKQLKGLSGFWDIVPAYLPAIYPVCSRLTSLNLSYATCQNP
DLGKLISQCHNLQRLWVLDYIEDTGLEELAANCKDLQELRVFPSDPFAPEPNATLTEQGL
VAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMIRFRLCIIEPRCPDYLTLGPLDAGF
GAIVENCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKIPRLNVEVIDERGPP
DTRPESCPVEKLYIYRSVAGPRFDKPGFVWTMDEEAAVRLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcattcccggaagaagttttagaacacgtgttctccttcctcagctccgac
gaagaccgcaactccgtatccttagtctgcaaatcatggtacgagatcgaacgctggtgt
cggaggagaatcttcgtcggaaactgctacgccgtgagccctagcattatgatccgacgg
ttcccagaagtcagatctgtagagtttaaaggaaagcctcattttgctgacttcaatctg
gtccctgaaggttggggtgcttatgtgcacccttggattgtggctatgtctaggtcttac
ccttggctcgaggaaattaggcttaagcgtatggtaattacggatgagtccttggagttg
atttctaaatcgtttaagaacttcaaggtgctggttttgtcttcttgtgatggttttact
actgatggtcttgcttctattgccgctaattgcaggaatattagagaactggacttggga
gagagtgaagtggaggaccttagcggacattggcttagccattttcctgatagctgcacg
tcacttgtttcacttaacattgcctgtttggcttctgagatcagtttcttagctttggag
cgtctggtttcccgctctcctaatttgaggactcttcggataaatcgtgctttgcccctt
gagaagcttccgaacctgcttcgtcgggcttcccagttgttcgaatttggtacaggtgcc
tactctgctgaagtacggtctgatgtcttctcaaacctgactgaagctttttcatgctgc
aagcaacttaaaggcttgtctgggttttgggacattgttccggcttaccttccagctata
tatccagtttgctccagactcacctctttgaatttgagctatgctacctgtcaaaacccc
gaccttggcaagctcataagtcagtgtcacaatttgcagcggttgtgggtcctagactac
attgaagatactggtcttgaggaacttgctgccaattgtaaggaccttcaagagctgagg
gtgtttccttctgatccttttgcccctgaaccaaatgcaaccttgacagagcaaggcctt
gtagctgtctcagatggctgcccaaagctccagtctgttttatacttctgccgccaaatg
acaaatgcagcattagttactattgctaggaatcgtcctaacatgattcgttttcgcttg
tgtattattgagcctcgatgtccagattacttaactcttgggccgcttgatgctggtttt
ggggccattgtggagaactgtaaagaattgcggcgactctcactttctggcctccttact
gatcgtgtctttgagtacatagggacccatgctaaaaagttagagatgctttccatagct
tttgctggggacagcgatttgggactccaccatgtgctctctggctgtgaaagcctccgg
aagctggagatcagagattgtccctttggagacaaggctctcttggccaatgctgcaaag
cttgagacaatgcgatccctttggatgtcttcttgttcagtaagttttggagcatgtaag
ctgctagctcagaagattcctaggcttaatgttgaagtcatagatgagaggggtcctcca
gatacaaggccagaaagctgccctgtagaaaaactttatatatatcgatcagtggctgga
ccgaggtttgacaagcctggttttgtttggacaatggatgaagaagcagcagtgaggttg
tcttga
DBGET
integrated database retrieval system
