Nicotiana tabacum (common tobacco): 107791867
Help
Entry
107791867 CDS
T04643
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107791867
03036 Chromosome and associated proteins [BR:
nta03036
]
107791867
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107791867
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
107791867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HTH_44
Tex_central_region
HHH_9
HHH_3
SH2
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
107791867
NCBI-ProteinID:
XP_016469498
UniProt:
A0A1S3ZYR2
LinkDB
All DBs
Position
Un
AA seq
1650 aa
AA seq
DB search
MAGKNVISDDEDEVGIEEEERDEEPVDGDAVDERDEEDEDEEEDEEGQDEYEKDGFIVDD
VEEEEEEGEEDRADSDDERQKKKKRKKRESERNYMLDEDDYELLQESNIAVPRPKLESKK
FKRLKKAQRDMDDARSGFSEEEEFDETGRRGRTAEEKLEHSLFGDDEGPPLEDIAEEEER
LEEEEDADIGEEDEMADFIVDEEEVDEHGAPIRRKKVNKKKSRQASGVSSSALQEAHDIF
GDVDELLMRRKQDRAKSGRHDESGEWSERRLEDEFDPTILSEKYMTEKDERIRKIDVPER
MQVSEESTGPVPPEAISVEESNWIYNQLAAGVVPFFKIKKKDSGKTDEESELPIDKDDIM
RFLDLMHGQKLDVPFIAMYRKEECMSLLKDPEEDETSDDGPNNSDKKPAVRRQKVLWAIQ
DLDRKWLLLQKRKSALELYYKKRFQEESRRVYDETRLKLNQQLFESITKSLQVADCEREV
DDVDSKFNLHFPPGEVGVDEGQYKRPKRKSQYSICSKAGLWEVASKLGYSAEQFGSHMSC
ESMGDLLEDARETPEEMASNFTCAMFETPQAVLKGARHMAAVEISCEPSVRKQVRKTFMD
DAKVSTSPTPDGNVVIDSFHQFAGVKWLRDKPLSDFEDAQWLLIQKAEEEKLLKVTIKLP
EVVLDKLITDSRDHYLSDGVSKSAQLWNEQRKLILEDAFFNFLLPSMEKEARSLLTSRAK
SWLLLEYGKFLWNKVSVGPYQRRESDVGSDEELAPRVMACCWGPGKPATTFVMLDSSGEV
LDILYAGSLSLRGQNVNDEQRKKNDQQRLLKFMMDHQPHVVVLGAVNLSCTRLKEDIYEI
IFKMVEDNPRDVGHEMDNLNIIYGDETLPHLYENSRISVDQLPGQSGIVRRAVALGRYLQ
NPLAMVATLCGPGREILSWKLSTLDSFLTPDEKYGMVEQVMVDVTNQVGVDLNLAISHEW
LFAPLQFISGLGPRKAASLQRSLVRQQTIFTRKDILTEHHLGKKVFVNAVGFLRVRRSGY
TANSNTYIDLLDDTRIHPESYGLAQELAKDIYLNDIGEENNDDDELLEMAIEHVREKPHL
ARLLKVPNYAKAKDRQDKEETLNDIRLELMQGFQDWRRQYVEPSQDEEFYMISGESEETL
SEGRIVQATVRRVQPQKAICALESGLTGILTKEDSSDDWREVNDLTEKMREGDILTCRIK
SIQKNRYQVFLSCKENDMRNNRYQNNQNLDPYYHEDRSSLQAEKDKAXRKGARXRKEKEL
AKKHFKPRMIVHPRFKNITADESMEFLSDKEPGESIVRPSSRGPSYLTLTLKVYDGVYAH
KDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLNYRKFRKG
SKAEVDELLRIEKSEYPMRIVYSFGISHEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRK
RMFEDIDRLVAYFQRHIDDPHDSAPSIRSVAAMVPMRSPAGGGSGFGGGWGGSSNDSGRR
GGQSGDRDSRPGRNDYRNRSSQDDPSGLPPRPYGGGGRGRGRGRGRGTYGRGRGNNDNDG
QDSDYGTQKWGSKEGGGGWGAEVQNSPARDTFSGGWSGGGSGAGGGSGDGGGWGGNGGGA
GWGQDTGGQSDDSGWGGGKKGSQSGGSGGW
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaaaacgtgatctccgatgacgaagacgaagttggaattgaggaagaagag
agggacgaagagcctgttgatggagacgcagtagatgaacgggacgaggaggatgaagac
gaagaagaagacgaagaaggtcaggatgaatatgagaaagatgggtttatagtagatgat
gtggaagaagaagaggaagagggtgaagaagatagagctgacagtgatgatgagaggcaa
aagaagaagaaaaggaagaaaagggagtcagagaggaattacatgcttgacgaagatgat
tatgaactacttcaggaaagcaacattgcggtgcctcgtccgaaacttgagagcaaaaag
ttcaagcggctaaaaaaagctcagagggatatggatgatgcgcgttctggtttttctgag
gaggaagagtttgacgaaactgggaggcgtgggcgtacagctgaggagaagctagagcat
agcttatttggtgatgatgaagggccaccactcgaggatattgctgaggaggaagagcgg
ctggaggaagaagaggatgctgatattggagaggaagatgaaatggccgactttattgtt
gatgaagaagaagttgatgaacatggcgctcctattagaaggaagaaggtgaacaaaaag
aagtccaggcaggcatcaggagtttcgtcttctgctctccaggaagcccatgacatattt
ggtgatgttgatgaacttttaatgcgtcgaaaacaagatcgggcaaaatcaggcaggcac
gacgaatctggtgaatggagtgaaaggagacttgaagatgaatttgatcctactattcta
tctgagaagtatatgacagagaaggatgagcgcattcggaaaatagatgtccccgaaaga
atgcaggtatccgaggaaagcactggtcctgtgccacctgaagctattagtgtggaagag
agtaactggatctacaatcagcttgctgctggcgttgtgcctttctttaagattaagaag
aaagatagtgggaaaactgatgaagagagtgagctaccaatagataaagatgacatcatg
agatttctggatttgatgcatgggcagaagcttgatgtcccgttcattgccatgtaccgg
aaagaggaatgcatgagcttattaaaggatccagaagaggatgaaactagtgatgatggc
cccaataattctgacaaaaagcctgctgtaagacggcagaaggtgctttgggcaatccaa
gatttagacagaaagtggctcctccttcagaagcggaagtctgcgctcgagttatactat
aagaagcgctttcaagaagagtcccgtagggtgtatgatgaaacacgtcttaagttgaat
cagcaactctttgaatcaattacaaaatcactccaggtggcggactgtgaaagagaagtt
gatgatgttgactcaaaatttaacttgcactttccacctggagaggttggtgtggatgaa
ggacaatataagaggccaaagaggaaatcacaatacagtatttgcagcaaagccggctta
tgggaagttgcaagcaagttgggatatagtgccgaacaatttggttcacacatgtcttgt
gaaagtatgggggatttgctggaggatgctagggaaacaccggaggagatggcgtcgaac
ttcacctgcgcaatgtttgaaacaccgcaagctgtgcttaaaggcgctagacacatggcg
gcagttgagataagctgtgaacctagtgtccggaaacaggtgcgtaagacctttatggat
gacgccaaagtatcaacgagtcctactcctgatgggaatgtggtgattgattccttccat
caatttgctggagtaaagtggttacgggataaacctctctctgattttgaggatgcacag
tggcttctcatacagaaggctgaagaggagaaactcctcaaagttactatcaagttgccc
gaagttgttcttgacaagctgataactgactcgagagatcattatctcagtgatggtgtg
agtaaatctgctcagttatggaatgagcagagaaagttaatacttgaggatgcatttttc
aattttcttctgccttcgatggagaaggaagctaggtcgttgctgacgagtagagctaag
agctggctgcttttggaatatggaaaatttttgtggaataaagtgtctgtgggaccatat
caacgcagagaaagtgatgtcggctctgatgaagagcttgcgcccagggttatggcttgc
tgttggggccctggaaagccagcaactacttttgtgatgttggattcgtcgggagaggtt
ctggatatcctgtatgctgggtctctcagccttcgtgggcagaatgttaatgatgagcag
cggaagaagaatgaccagcagagactgttaaaattcatgatggaccaccaaccacatgtt
gtggtgctgggagctgtaaatctatcttgtacacggcttaaggaggatatttatgagata
attttcaaaatggtggaggataatccaagagatgttggtcatgagatggataatttgaac
ataatatatggagacgaaacccttccacatctctatgagaattcccgcatttcagttgac
cagctccctgggcagtcaggtattgttaggcgcgctgtggcactgggacgttatcttcaa
aatcctttagcaatggtagcgacattgtgtggaccaggcagggagattttatcttggaag
ctgagtactttagatagttttcttacaccagatgagaagtatgggatggttgaacaggtt
atggttgatgtaactaaccaggtgggtgttgatcttaatttggctataagtcatgaatgg
ttgtttgcccctttgcaatttatttcggggctaggtcccagaaaggcagcatctcttcaa
agatccttggtaagacagcagacaatcttcactaggaaggatatcttgactgaacatcat
cttggtaaaaaggtatttgtgaatgcagttggcttcttgcgagtaaggcgtagtggatac
actgctaacagtaatacatatattgacttgttggatgatacaaggatccacccagaatcc
tatggtcttgcacaggagttggccaaagatatttatcttaatgatatcggtgaagaaaat
aatgatgatgatgaactgcttgaaatggcaatagagcatgttagagagaagccacatctg
gcgaggttacttaaagttccaaactacgccaaagccaaagatcgtcaggacaaagaggaa
actctcaacgatataaggttagagctgatgcaagggtttcaagattggcgtagacagtat
gtggagccaagccaggatgaggagttctatatgatttctggcgagtctgaggagacactt
tccgagggaagaattgtgcaggcaacagttcgccgagttcaacctcagaaagctatctgt
gctctcgagtctggattgactggcattcttaccaaagaagattcttcagatgattggaga
gaggtcaatgatttgactgaaaaaatgcgtgaaggtgatatcttaacttgcagaatcaag
tcgatccaaaaaaatcggtaccaggttttccttagctgtaaagagaatgatatgagaaat
aataggtatcagaataatcagaacttggatccatactaccatgaagatcgcagtagttta
caggctgaaaaggataaagcttaaagaaaaggagctcgcnttcgtaaagaaaaggagctt
gcaaagaagcatttcaagccaaggatgatagttcatcctcgattcaaaaatataacggca
gatgaatcaatggagttcttgtcggacaaggaaccgggtgaaagtatcgtacgtcccagc
tcacgcggaccatcttatttgactttaactctcaaagtgtacgatggagtttatgctcac
aaggatattgtggaaggtggaaaggaacataaggacataacaagcttgctccgtatcgga
aaaacattgaaaataggagaggatacttttgaggatttagatgaggtaatggatcggtat
gtcgatccattagtagctcatttgaaggcaatgctgaattaccgcaagtttaggaaggga
tcaaaggcagaagttgatgaacttttgagaattgagaaatctgagtaccctatgaggatt
gtctatagctttggtatttctcatgaacaccctgggacattcattttgacttacatacgg
agttccaacccgcaccatgagtatgttggtctgtacccgaaaggatttaaattccgcaag
aggatgtttgaagatattgatcgccttgtggcatattttcaaagacatattgatgatccc
catgactctgcaccatcaatacgatcagttgcagcgatggtacctatgcgcagccctgca
ggtgggggctcaggatttggtggcggttggggtggttcatccaatgatagtggtcgaaga
ggtggtcagtctggggacagagattctagaccaggtagaaatgactacagaaatcgaagc
agtcaggatgatccaagtgggttgccgcccaggccctatggtggtggtggtcgtgggcgt
gggcgaggacgtggtcggggaacatatggacgtggtagaggaaataacgacaatgacggg
caagattcagattatggcactcaaaagtggggttctaaggaaggtggaggaggatggggt
gcagaagtccaaaattcacctgctagagacactttctctggtggttggagtggtggtgga
agtggtgccggaggtggtagcggagacggaggtggttggggaggcaatggtggtggtgct
ggctgggggcaggataccggtggtcagtccgatgattctggctggggtggcggtaaaaag
ggttcacaatccggtggcagcggagggtggtga
DBGET
integrated database retrieval system
