KEGG   Nicotiana tabacum (common tobacco): 107791916
Entry
107791916         CDS       T04643                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03030  DNA replication
nta03410  Base excision repair
nta03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107791916
   03410 Base excision repair
    107791916
   03420 Nucleotide excision repair
    107791916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nta03032]
    107791916
   03400 DNA repair and recombination proteins [BR:nta03400]
    107791916
Enzymes [BR:nta01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107791916
DNA replication proteins [BR:nta03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    107791916
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      107791916
SSDB
Motif
Pfam: DUF1744 POL2_thumb zf_DPOE_2 DNA_pol_B zf-DPOE
Other DBs
NCBI-GeneID: 107791916
NCBI-ProteinID: XP_016469554
UniProt: A0A1S3ZYX8
LinkDB
Position
Un
AA seq 1749 aa
MKVLQRCLEVRGVPVAYIRAINDMYDGAKTRVRTMGGDLEHFPVVMGLHQGSALNPFLFG
LAIDALTRHIQGELLINNLDRDLQYAIVVEGKMDLESVINYDEVKNSIMEKLMRLRDNPL
TEECPLIYHLDVAAMYPNIILTNRLQPPSIVSDEICTACDFNRPGKKCLRKLEWVWRGET
YMAKRSDYYHIKRQLESELVEVGDGQRSKSFLDLPKADQQAKLKDRLKKYCQKAYKRVLE
KPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKAWKGKLSEAKASGNSIKIQEAQ
DMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGK
PLELDTDGIWCALPGSFPENYTFKTKDPKKKVTISYPCVMLNVDVARNNTNDQYQTLKDP
INKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRR
GELKLIKVFQAELFDKFLHGSTLEECYSVVASVADRWLDLLDNQGNDIADSELLDYISES
STMSKSLADYGEQKSCAVTTAKRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSERAIPV
AIFETNADIMRFYVKKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPV
PRVVHPDWLHKKVREKEDRFRQRKLNDIFSSVNRDDAVPSKNSKNQQNIEDLEDFRHSGK
SSIYGPRPVVHRHGVNKEHPVNTSDQVDNQQQSGHASSLCKMLPSQEIAAVEDIDRNVDY
HGWLQQKKRKWKEIREERKRRRLDTSRTVNHVNGSTELSHHMVNHKHQGRTGVNSYFERH
ELALTRSHWQIVQLEPTSQHGQFFAWVVVEGVMHKISVTIPRVFYLNSKAPITEEFPGRR
VNKILPHGRHSYNLIEVIIDEDQFKSESKKLAAHLADPEVEGIYETKVPLEFSAILQTGC
VCKVDKAAKKRNPQDGWSLSELHMKTTTECPYLDQSITFFYLYHSLSDGRAIYVGYFPSS
KMIHVVVVNPFQNKELSPHILERHYYEACQTLSGQPITQKEGISFKVDYVRHIKEAERSL
QRIINEHRHHGPAVAMIECLNAHSLKSGIRALDDFPCISIPCNARDSQYQALGWQNVAAK
IGMQRCVTSSQWLNERITLSRYAHVPIGNFDVDWLMHTADIFFSRALRDQQQVLWISDNG
IPDLGGVNDEASSFMDEVNQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGTL
FGLDQDLNSTTNFTNDNYCFDATTSCAPAFRVLKQLIQRCLTDAVTSGNIFADAMLQHLY
RWLCSPRSRLHDPALHSMLHKVMQKMFALLVAELRKLGAAIVFASFSKIIIDTGKSDVSA
AKAYCDSVIKTVQNRELFEWIELEPLQFWHSLVFMDQYNYGGIQARLSDGPLEVNSEPGE
ESVCGESQVDIVSSWNIAENLPKATQDHFILIVSEFMFIPWKFAQEQATHRASSSIGDLC
TPSITAALAETFDLQMAEDLKKKIRTYFTDKLLKIVCDPNLQMKAMTNSQKTQETSDANS
QSYTHVQKGDPALEFIKHVCAVLALDQNVQHEVLIMRRNLLKLVRVREFAPEAEFHGLSV
SYTLPNVICSYCNDCRDLDLCRDRALISQEWCCAVPQCGQPYDREAMENALIQIVRQRER
LYHLQDLVCLKCHQIKAAHLADHCTCAGSFSCKEGVSEFCNKIQVFFNIAVNQKFQLLQE
CTSWILEAR
NT seq 5250 nt   +upstreamnt  +downstreamnt
atgaaggtgttgcagagatgtttggaggttagaggtgttcctgttgcatacattagggct
attaacgacatgtatgatggtgctaagactcgggtgagaacaatgggaggggacttggaa
cacttcccggttgtgatggggttgcatcaggggtcagccctcaacccatttttgtttggc
ctagcgatcgatgcgctgacgcgtcacattcaaggggagctattgatcaacaaccttgat
agagatctgcagtatgccattgtagttgaggggaagatggatttggaatctgtcataaat
tatgatgaagtgaagaattccatcatggaaaagttaatgagattgcgagataatccttta
acggaagaatgtcccctcatatatcatcttgatgtcgctgcaatgtatccaaacatcata
ttgacaaataggcttcagccaccatcaatagtttcagatgagatatgcactgcatgcgac
tttaatcgtcctggcaaaaagtgtctccggaagcttgaatgggtttggcgtggtgaaacg
tacatggcaaagagaagtgattattaccacataaagaggcagctcgagtctgaacttgtc
gaagtaggagatggtcaacgatcaaagtcttttcttgatttgcctaaagcagatcaacaa
gcaaagctgaaggaccgcttaaagaaatactgtcaaaaggcatataaaagagtcctggaa
aagccggtcacagaacttcgagaagcagggatctgcatgcgagaaaatcctttctatgtt
gacaccgtacggagtttccgagataggcgatatgaatacaaagggcttaataaagcttgg
aagggtaagctgtctgaagcaaaggctagtggaaattccataaaaattcaagaagcacag
gacatggtagttctatacgattcattgcagctggctcataaatgcattttgaattccttt
tatggttatgtcatgcgaaagggtgcaaggtggtactcaatggagatggctggagttgtt
acatatacgggcgcaaaaatcattcagaatgctcggttattggttgaaaaaattggaaaa
cccctcgaattagacacagatggtatctggtgtgcattaccaggctcttttcctgagaat
tatacattcaagacaaaagatcccaaaaagaaggtgacgatctcctatccttgtgttatg
ctgaatgttgatgtggcaagaaacaacaccaatgatcagtaccagactctgaaggacccc
atcaataagacgtatacaacacacagtgaatgctcaattgagtttgaagtcgatggacca
tataaggcaatgattcttcctgcttccaaggaagaaggtattctgattaagaagcgctat
gcagttttcaacgatgatggtacacttgctgagcttaaaggttttgagattaaacgtaga
ggtgagctaaagctcatcaaagttttccaggctgagctttttgataagttccttcatgga
tcaaccttagaggaatgctattcagtagttgcttcagttgcggatcggtggcttgacctg
cttgataatcaaggcaatgatattgcggacagtgagttgcttgattatatatctgaatca
agcacaatgagcaagtctctagccgattatggtgagcaaaagtcatgtgcagtaaccaca
gcaaaaaggcttgctgattttctgggggatgcaatggtcaaagataaagggttgcgttgt
cagtatattgttgcatgtgagccaaagggaaccccagtaagtgaacgtgctattcctgtt
gcaatatttgaaactaatgctgatatcatgaggttctatgtcaaaaagtggtgcaaaata
tcatcagaagttggaatacgttccattattgattggtcttattacaagcaacggcttagt
tcagcaatccagaagattatcacaattcctgctgcaatgcagaaggtttcaaaccctgtg
ccaagggtggttcatcctgattggctgcataagaaggttcgtgaaaaagaagacagattt
cgccaacgaaaattaaatgatatcttcagctcagtgaacagagatgatgcagtgcccagt
aaaaattctaaaaatcagcaaaatattgaagacctggaagactttagacacagtggtaaa
tcgtctatatatggtccgaggcctgttgtacatcgtcatggagtcaacaaagaacatccg
gtaaacactagtgatcaagtggacaatcaacaacaaagtggtcatgctagcagtctatgc
aagatgttaccttcacaagaaattgctgctgtggaagatattgacaggaatgtagattat
catggatggctacagcaaaaaaagagaaaatggaaagagattcgtgaggagaggaaacgc
cgaaggttggatacctcaaggacagtaaaccatgttaatggcagtactgaattgtctcat
cacatggtaaaccacaaacaccagggtagaactggggttaattcctactttgagcgacat
gaattagctctcacacgaagtcactggcagatagttcagcttgagcctacttcacagcat
ggacaattttttgcatgggtagttgtggaaggagtcatgcacaaaatttcagtaactatc
ccccgagtgttttacctcaactccaaagctcctataacagaggaatttcctggaagacgt
gtcaacaagattcttcctcatggacgccatagctacaatttaattgaggttattattgat
gaggatcaattcaagtcggagagcaaaaagctagcagctcaccttgctgatccagaagtg
gagggaatatatgaaacaaaggttccattggagttcagtgctattctccagacgggttgt
gtttgtaaagttgataaagcagctaaaaaaaggaatccacaagatggttggagtttgagt
gagctgcatatgaagacaaccactgagtgcccgtatttggaccagtcaataactttcttc
tacttatatcacagcttgtccgatggacgagccatttatgtgggatattttccttcgtcc
aagatgatacatgtcgtggttgttaatccatttcaaaacaaggaattatcaccacacatt
cttgaaagacattattatgaagcttgccaaacattgtctggtcagcctatcacacaaaag
gaaggtattagttttaaggtggattatgtcaggcacatcaaggaagcggagaggagtcta
cagagaataataaatgagcataggcatcatgggcctgcagttgccatgattgagtgcctg
aatgcccattcgctgaagtctggtatacgagctttggatgattttccttgcatcagtatc
ccttgtaatgctcgggatagccaatatcaggcactaggctggcaaaatgttgcagcaaag
attggaatgcagcgatgtgttacatcctcccagtggttaaatgaaaggatcactctctca
agatatgcccatgttcccatagggaattttgatgttgattggctcatgcatacagcggat
atcttcttttctagagcactgcgtgatcagcaacaggtcttgtggatatctgataatggc
atccctgacttgggaggcgtaaatgatgaagcatcgtcttttatggatgaggtcaatcaa
ccggttcttacttacccgggtgcatatagaaaagttactgttgagctgaagattcatcat
ctggccgttgatgctcttctgaaaagcaaccaagtaaacgaaatggaaggaggcactttg
tttggattggaccaggacttgaactctaccacgaattttactaatgataattactgcttt
gacgcaacgacctcctgtgcacctgcatttcgtgtactcaaacagttgatccagaggtgc
cttacggatgcagtaacatcaggaaacatatttgctgatgcaatgctgcaacatttgtat
cgatggctctgcagcccccggtctagactacatgacccagctctccacagtatgcttcac
aaggttatgcaaaagatgtttgcattgcttgtggctgaactccgaaaattgggtgctgct
attgtgtttgccagcttctcaaaaattataattgacactggaaagtcagatgtatctgca
gccaaagcctactgtgatagtgttattaaaacagtacaaaatagagaattgtttgagtgg
attgaacttgagcccttgcagttttggcactcattggttttcatggatcagtacaattat
gggggaatacaagctagacttagtgatgggcctttagaagttaactcagaaccaggtgaa
gaaagcgtgtgtggtgaatcacaagtcgacattgtgtcaagctggaacattgcagaaaat
ttaccgaaggcaactcaggatcacttcattttgattgtttcggaatttatgtttattcca
tggaaattcgcacaagaacaagctacacatcgagcatctagtagcattggtgatttatgt
acaccatcaatcactgctgcacttgctgaaacatttgatttgcaaatggcggaagatcta
aagaagaagatccgaacttacttcactgacaaacttctgaaaattgtttgtgaccctaat
cttcaaatgaaagcgatgaccaactcccagaagactcaggagacatcagatgcaaactca
caatcttatacccatgtccagaagggggatccagctttagagttcattaagcatgtctgt
gcagttttggcccttgaccagaatgtgcagcatgaagttctgatcatgaggagaaatcta
ttaaaacttgttcgtgtgagggaattcgctccagaagcagaatttcatggtctctctgtg
tcgtatacccttccaaatgtcatttgcagttactgcaacgactgcagagaccttgacctg
tgtcgagacagagctttgatttctcaggagtggtgttgtgctgtgccccaatgtgggcaa
ccttatgatcgtgaagcaatggaaaatgctcttattcaaattgtgcgacagagagagagg
ctataccatcttcaagatctggtatgcctaaaatgccaccagattaaagctgcacattta
gcagaccactgtacttgtgccggatcatttagctgcaaggaaggtgtctcagagttctgc
aataaaatacaagtcttcttcaacatagctgtaaatcaaaagtttcaattactccaagag
tgcacttcttggattttggaagccagataa

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