Nicotiana tabacum (common tobacco): 107792003
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Entry
107792003 CDS
T04643
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107792003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107792003
Spliceosome [BR:
nta03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
107792003
Complex B
107792003
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Ortholog
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Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
107792003
NCBI-ProteinID:
XP_016469660
UniProt:
A0A1S3ZZ96
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Position
3:129528392..129534471
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AA seq
473 aa
AA seq
DB search
MGDFNDAFMRNNPNVQARAKAQNRANVMQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPP
PEKRKCPSYTGMAQFVGKFAQPGDPEYAPPVPEVETPAQRKARIHKIRLEEGAKKAAEEL
EKYDPSSDPNVTGDPYKTLFVARLNYETTESRVKREFEAFGPIKRVRLVTDNTNNKPRGY
AFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGTEDV
NREVVQIGRAASRSEEPRVRDDRERDREKSRDRVRDRDREKSRERSHDRPRERDRDDKHH
KERERTRDRERDRGRDRDRDRERDRTRDRERGKDRDRERDRHRERDRERGKDYEGEGDQG
RGRSRDREYDYEHGESKHERERHGDRERNYDHAEPEDDHGHYDHYDHHQGRGDYENPDAQ
AGDDRYKDTSRGDDRYDQMEEDNYAYDHGASETKERDRDHRRSDRSHSREYDY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggagatttcaacgatgccttcatgcggaacaaccctaatgtccaggcccgtgcaaag
gctcagaatcgcgctaatgttatgcaactcaagctgattggtcaaagtcatccaactggg
ttgacggctaatcttctgaagctgtttgagccccgaccacctttggagtacaaaccacct
cccgagaagagaaaatgcccttcatatacagggatggcacaatttgttggtaaatttgct
cagcctggtgatccagaatatgctccaccggtccctgaggttgaaaccccggctcaacga
aaagctaggatccacaagataaggctggaggaaggtgctaaaaaggctgctgaggagctt
gagaaatatgatcctagcagtgacccaaatgttactggagatccatacaagacactcttt
gttgctagactcaattacgagacaacagaaagcagagttaaacgtgaatttgaggctttt
ggtccaatcaagcgggttcgtttggttacggacaatacaaacaataagcccaggggttat
gcttttattgagtatgttcatacacgggatatgaaagctgcttataaacaagctgatgga
aagaagattgataatagaagagttctggttgatgttgaacgtgggagaacagtccccaat
tggcgtccccgcagacttggcggtggacttggaacaacaagagttggaactgaagatgtt
aatagagaggtagttcagattggaagggcggcatctcgctccgaagagccaagagtacga
gatgacagagaaagggatcgggagaagtcccgtgatagggtgcgagatagagatagagaa
aaatctcgtgaacgttcacatgataggccaagggaacgcgacagagatgacaaacatcat
aaggaacgcgagagaactagggatagagaaagagatcgtggacgagaccgcgatcgagac
cgtgaacgtgacaggacacgtgaccgcgaacggggcaaagatagggaccgtgagcgagat
cgccaccgtgagagggatagggaaagaggtaaggactatgaaggtgagggggaccagggt
cgtgggcgttctcgtgatagagaatatgattatgagcatggtgaatctaaacatgagcgg
gaaaggcatggtgacagggaaaggaactatgatcatgcagaacctgaagatgatcatgga
cattatgaccattatgatcatcatcaaggccgaggagactatgagaatccagatgctcaa
gctggtgatgatcgctataaagataccagtcgtggtgatgatcgttatgatcaaatggag
gaagataattatgcttatgaccacggagcatctgagacaaaagaaagggaccgtgatcat
aggcgttcagataggtcacattctcgtgaatatgactactga
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