Nicotiana tabacum (common tobacco): 107792024
Help
Entry
107792024 CDS
T04643
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107792024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107792024
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107792024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_EIPR1
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT122_1st
PEP5_VPS11_N
WD40_like
Beta-prop_LRRK2
Ge1_WD40
TAF1C_beta-prop
Cytochrom_D1
VID27
Beta-prop_IP5PC_F
VPS8_N
Motif
Other DBs
NCBI-GeneID:
107792024
NCBI-ProteinID:
XP_016469684
UniProt:
A0A1S3ZZA7
LinkDB
All DBs
Position
Un
AA seq
907 aa
AA seq
DB search
MGIFEPFRAIGYITTNVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLAGPQLPKKIR
ALASYREYTFAAYGSDIAVVKRAHQVATWSGHSAKVNQLLLFGEHVLSVDVEGNIFIWQF
KGIDKNPAPIGHIKLDDKFSPSCIMHPDTYLNKVMVGSQEGALQLWNISTKKKIYEFKGW
GSSITCCVSSPALDVIAVGCADGKIHVHNIRYDEEVATFSHSTRGAVNALSFSTDGQPLL
ASGGSSGVISIWNLEKRRLHSVIREAHDSSIVSLQFFANEPVLMSSSADNSMKMWIFDTS
DGDPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQRRELSQRHVSKR
AKKLKLKEEEIKLKPVIAFDVAEIRERDWCNVVTCHMDTPRAYVWRLQNFVLGEHILTPC
PENPTPVKACAISACGNFAVLGTAGGWIERFNLQSGISRGNYIDLLEGKSAAHNGEVIGI
ACDATNTIVISAGYHGDVKVWDFKGRDLKYKWDVGCSLVKIVFHRSNGLLATVADDLVIR
LFDVIAQRMVRKFEGHIDRITDMCFSEDGKWLLTSSMDGTLRIWDIILARQIDAVQVDLS
ITALSLSPNMDILATSHVDQNGVYLWVNQAMFSGTASFASYGSGQEIVNVKMPSVSSAKD
GENNDNKTIVKQSESSDTSQFLYSGHQIPDLVTLSLLPKSQWQSLINLDIIKARNKPIEP
PKKPERAPFFLPSIPSLSGEILFKPSKGANEENNTQNTELEKNSKKTDLPLSKFLQILQS
CAEKENFATFTDYIKSLSPSTLDMELRMLQIIDDDDEQEPEKRQELQFIELLVDYFIHEV
SYRNNFEYIQALVRLFLKIHGETIRRQSKLQDKARKLLEVQSAVWQKVDKLFQSARCMVT
FLSNSQF
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggggatattcgaaccgtttagagcaattggatacattacgacaaatgttcccttctct
gtacagagacttggcactgagaccttcgtcaccgttagtgtcggcaaagctttccaagtt
tacaactgcgctaaactcaatttggtccttgctggtcctcaattgccaaagaagattcga
gctctcgcttcttatcgtgaatatacttttgctgcctatgggagtgatattgcagttgtt
aagcgtgctcatcaggtggctacttggagtggccatagtgctaaggtcaatcagctgctt
ctttttggtgaacacgtcctaagtgttgatgttgaaggcaatatcttcatatggcagttt
aaaggtatagacaagaatcctgctccgatcggacacataaagctagatgataaattctct
cctagctgcataatgcatccagacacttatttaaataaggttatggtaggaagtcaagaa
ggtgctttgcaactctggaatataagcacaaagaagaaaatttatgagttcaagggatgg
ggatcttctattacttgttgtgtttcatctccagcactagatgttattgctgttggatgt
gcggatggaaagattcatgttcataacattcgttatgatgaagaggtagctacatttagc
cactctacaagaggtgctgttaatgccttgtcattcagcactgatgggcagccgcttcta
gcttctggaggctcatctggtgttataagcatatggaatcttgagaagagaaggctgcac
tctgtcatcagggaggcccatgactcctccatagtttcacttcagttctttgctaatgag
cctgtcctcatgagttcatccgcagacaattcaatgaaaatgtggatcttcgatacaagt
gatggggaccctcgtttactacggtttagaagtggtcacagtgctcctcctctatgtatc
aagttctacgcaaatggacgtcacatcttgtctgctggtcaagatcgagcgtttcgtctt
ttttctgttgttcaggatcaacaaaggagagaactttcccagcgacatgtgtctaaaaga
gcaaagaagcttaagttgaaagaggaggagataaaattgaagcctgttattgcatttgat
gttgctgaaatcagggaacgtgattggtgcaatgtggttacatgtcacatggacacccca
cgggcttatgtatggaggcttcagaattttgttctcggtgagcatatcttaactccatgc
cctgaaaatccaactccagtcaaggcctgtgctattagtgcctgtggcaattttgctgta
ctagggactgccggcggttggattgagcgattcaatcttcagtcaggaatcagccgtggc
aattatattgatctgttggaaggtaaaagtgctgctcacaatggggaagtaattggcata
gcttgtgatgcaacaaataccatcgtgataagcgctggataccatggtgatgtaaaagtt
tgggacttcaaaggacgtgatttgaaatataaatgggacgttgggtgttccttagttaag
attgtgttccaccgttctaatggtcttttggctactgtggcagatgacttagttatccgt
ctatttgatgttattgcacagaggatggttcgtaaatttgagggtcacattgaccgtatc
actgatatgtgttttagcgaggatgggaaatggcttttgacatccagtatggatgggact
ctcagaatttgggatataattttagctaggcagatagatgcagtacaggttgatctgtct
atcactgcattatctttatcgcctaatatggatatcttggccacatctcatgttgaccaa
aatggcgtctacctgtgggtcaatcaagcgatgttctctggaactgccagctttgcatca
tacggaagtggacaagaaatagtcaatgttaagatgccgtcagtttcttctgcaaaagat
ggtgaaaacaatgataacaaaactattgttaagcaatcggagtcctctgatacttcccag
tttttatattcaggtcatcaaattccagatctagtcactctttcactattgcctaagagt
caatggcagagcttgatcaacctggacataataaaggcccgcaacaaacccattgagcct
ccaaagaaacctgaaagagcaccttttttcttgccttcaataccgtctctgtccggtgag
atattatttaaaccaagcaaaggtgctaatgaggagaataatacacaaaataccgaattg
gaaaagaacagtaagaaaactgatcttccactatccaagttcttgcaaattcttcagtca
tgcgcggagaaagagaactttgcaacattcactgattatatcaaaagcttgtcgccttca
acattggatatggagctccgaatgcttcagataatagatgacgacgacgagcaggagcct
gagaagagacaagaattgcaatttattgaactgctagtggattactttattcacgaggtt
tcatacagaaacaattttgagtatatacaggctctggttagattgtttttgaagattcat
ggtgaaacaattcggcgccaatcaaaattgcaggataaggcaagaaagcttttagaagtt
caatctgcagtttggcaaaaagtagataaattgttccaaagcgccagatgcatggtcaca
tttcttagcaactctcaattttga
DBGET
integrated database retrieval system
