Nicotiana tabacum (common tobacco): 107792249
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Entry
107792249 CDS
T04643
Name
(RefSeq) nuclear poly(A) polymerase 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107792249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107792249
Enzymes [BR:
nta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
107792249
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
107792249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
NTP_transf_2
PAP_RNA-bind
Motif
Other DBs
NCBI-GeneID:
107792249
NCBI-ProteinID:
XP_075087460
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All DBs
Position
15:complement(133568389..133573484)
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AA seq
524 aa
AA seq
DB search
MEFGISENQLSHLNPPFTRILGFRRSPDVILRIEMERSMSLFQMMVNEGLVPSAAEEMKR
RNAIDKLKKIVVEWVKEVTYQRGLPKKYLKFASGTILTYGSYGLGVYNSDSDIDALCVGP
YFATIAEDFFIVLHNMLASRPEVSEIHCVKYAKVPLMRFKFDGISIDLPYARLKVISIPE
NVDVFNPFFLKNIDDTSWKSLSGVRANRSILHLVPNIEIFQAVLRCIKFWAKRRGVYGNL
LGFFGGVHLAVLSAFICQRHPSASLSALILLFFKTFGLWPWPTPVILQETIARPFIPTDK
VSWMPIQLPCSPYEFCHSNITRSTFYKIRTEFLRGHMLTKDMLRPDFDWNILFEPFPYAR
RYGLFVKIFLSACDKDELGDWVGWIKSRFRSLLVKLEELLGFCDPNPTEYVDTDASEPNV
ILYWGLPTNRRDLIDADLVEEYFLKSIDNGYQGSTGKMKLSIVKANQLPKKAQFAFERKN
TKPCWRVVDDNRKKNNPRSKYSKPHCADEYLPTNDSPEYPSAGG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaatttggaatttctgaaaaccaattaagccatttgaatccaccctttacaagaatt
ctgggtttcagacgaagcccagatgtgattttgagaatagaaatggaaagatcaatgtct
ctgtttcagatgatggtaaatgaaggtttagtgccttctgcagcggaggaaatgaagagg
agaaatgctattgacaagcttaaaaagatagtagtggaatgggttaaagaggtgacttac
cagcgaggtcttccaaaaaagtaccttaagtttgcctctgggacaatattgacatatgga
tcgtatggtttaggggtttataattcagactcagatattgatgctttgtgtgttggtcct
tactttgccactatagctgaagactttttcatcgttctgcataacatgcttgcgagcagg
cctgaagtatcggaaatccattgtgtcaagtatgcaaaagttcctctgatgcgattcaaa
tttgatgggatatccattgatcttccctatgcacgactcaaagtaatatccatccctgag
aatgtggatgttttcaatccattctttctgaagaatatcgatgacacgagctggaaaagt
ttgtctggtgtgcgtgccaataggagcattcttcatcttgtgccaaacatagagatattc
caagcagtactgcgttgcatcaaattttgggccaaaagacgaggagtttatggaaatttg
cttggattctttggaggagttcacttggctgtgctttcagcgtttatctgccaaaggcat
ccatccgccagcttaagcgcactcattttacttttcttcaagacatttggcttatggcct
tggccaactcctgtaattttgcaagagactatagctcggccattcatccccactgataag
gtgtcgtggatgccaatccagttaccgtgtagcccatacgaattttgtcattccaacatt
accagaagtacattctataaaatcaggaccgaattcctaagaggtcatatgctgactaag
gatatgctgaggccagattttgattggaatatcctttttgagccatttccttatgcaaga
agatacggactcttcgtcaaaattttcctctcagcttgtgacaaagatgagttaggagac
tgggtgggttggatcaagtcacgctttcgctctttacttgtcaagctggaggagttactt
ggtttttgcgaccccaacccgactgagtacgttgacacagatgcatcagagcctaatgtc
atcctctattggggattaccaactaatagacgcgatctaatagacgctgatcttgtggag
gaatactttctaaagagcattgacaatggatatcaaggctcgaccggaaagatgaagtta
tcgatcgtgaaagcaaatcagttgcctaaaaaagctcagtttgctttcgaacgaaagaac
actaagccgtgttggagggttgtcgatgacaatcgcaaaaaaaacaatccacggtccaag
tatagtaagcctcattgtgctgacgaatatttgcctacaaatgatagtcccgagtaccct
agcgccgggggataa
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