KEGG   Nicotiana tabacum (common tobacco): 107792496
Entry
107792496         CDS       T04643                                 
Name
(RefSeq) uncharacterized LOC107792496
  KO
K03504  DNA polymerase delta subunit 3
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03030  DNA replication
nta03410  Base excision repair
nta03420  Nucleotide excision repair
nta03430  Mismatch repair
nta03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107792496
   03410 Base excision repair
    107792496
   03420 Nucleotide excision repair
    107792496
   03430 Mismatch repair
    107792496
   03440 Homologous recombination
    107792496
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nta01009]
    107792496
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nta03032]
    107792496
   03400 DNA repair and recombination proteins [BR:nta03400]
    107792496
Protein phosphatases and associated proteins [BR:nta01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107792496
DNA replication proteins [BR:nta03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    107792496
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      107792496
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     107792496
SSDB
Motif
Pfam: CDC27 MsyB
Other DBs
NCBI-GeneID: 107792496
NCBI-ProteinID: XP_016470204
UniProt: A0A1S4A0S5
LinkDB
Position
Un
AA seq 492 aa
MQVSYKWLSRNFLVSSDSAKRLLQEFVEKQGNDFEVVYSLSGWLKTSPSTYHIRLVSAPN
LAEAKKEFSDDCSVQVYSVQACIPKDPVALWNAEFVQAEELFRLPLSVDNCLLDNRFCGV
SNPFVKRNGGGTIPSTTTVPQVKSAALGLRKSNSTALAQPDQKKVQLPSPSASLPSSHVV
DAKSESRGTSGPGQGSKLAAEKDKVAQLPAAKKAVQSDKSSAKNGGALANMWGRVSTKPK
ADSVAAATSDATPNPAGNAAQICTPEGVEDRVSDDDDQQVSIRRTSNGEGNRKRRVIFDF
SDEEDEFKDAVNLASPDPPKQKSILGSKQSPSTLELEKQEVKKAKEAGTKNHEREREPLP
TSESEKSKLSSSEMISEHASLKNATIKDEMADAAPVSPKRRKVLKTRIDERGREVTEVVW
EGEDGETNADSNTMKKADNKPVKSTGDRPPMAKKSPALASTAPTRQAGKEGNKKTGNKDP
KQGNILSFFKKA
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgcaggtttcatacaagtggctgagtcgtaattttctggtgtcatcagattctgcaaag
aggttgcttcaggaatttgtcgaaaagcagggaaatgattttgaggtggtctacagcttg
tctggctggttgaaaactagcccttcaacctaccatataagacttgtctctgctcctaac
ctcgcagaagccaagaaagaattttcggacgattgctcagttcaggtctatagtgtgcaa
gcttgcatcccaaaggatccagtggccctctggaatgctgaatttgtgcaggccgaagag
ctcttcaggctgcccctctcagttgataattgtttgcttgataataggttttgtggagtt
tcaaatcctttcgtcaagcgcaatggtggaggaacaattccaagcactaccactgttcct
caagtgaaaagtgcagcattaggacttcgtaaaagtaactctactgccctagcgcaacct
gatcagaaaaaggttcaactaccaagtcctagcgccagtttgccatcttcgcatgtggtt
gatgccaaaagtgagagtcgtggcacatcaggtcctggacagggtagtaagcttgctgca
gaaaaagacaaagttgctcaactgccggctgctaagaaggcagttcagtctgacaaaagt
tctgctaaaaatggcggggcattggctaatatgtggggtcgtgtatccacaaagccaaaa
gccgacagtgttgcagctgctaccagtgatgccacaccaaatcctgctggtaatgcggct
caaatatgtactccggaaggagtagaagatagggtcagcgatgatgatgatcaacaagtc
agcatcaggagaacatcaaatggtgagggaaatagaaagaggagggtaatttttgatttt
tcggatgaagaagatgaattcaaggatgccgtcaacctagcatcacctgatcctccaaag
cagaaatcgattttaggatcaaaacaaagtcctagtactctagaactggaaaagcaggaa
gtcaagaaggcaaaggaggctggcaccaagaatcatgaacgagaaagagaacctttacct
accagcgaatcggagaagtctaagttgtcctcttcagagatgatttcagaacatgccagt
cttaagaatgcaactataaaggatgaaatggcagatgctgctccagtttcccctaaaagg
agaaaagtattgaagacacgaattgacgaacgtggaagagaagtgaccgaggttgtttgg
gagggtgaagatggagaaacaaatgctgacagtaatacaatgaagaaagctgacaacaaa
ccagttaaaagtactggtgacagaccacccatggctaagaagtctcccgcactggcaagt
actgcacctacgcgtcaagcaggtaaagaaggaaacaaaaaaacaggaaataaggatcct
aagcaagggaatattctatcattttttaagaaggcttag

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