Nicotiana tabacum (common tobacco): 107793153
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Entry
107793153 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 11
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107793153
03041 Spliceosome [BR:
nta03041
]
107793153
03036 Chromosome and associated proteins [BR:
nta03036
]
107793153
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107793153
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107793153
mRNA cycle factors
Common to processing body (P body) and stress granule
107793153
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107793153
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107793153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107793153
NCBI-ProteinID:
XP_016470923
UniProt:
A0A1S4A2R8
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All DBs
Position
9:complement(126170899..126180609)
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AA seq
593 aa
AA seq
DB search
MAMSWADSVSAAENPAGAASKSAYVPPHLRNRPSIEPPAQASYAGAAALGNDHSGYGVPN
VVGSRWSGQRTENRSGYVGGGGRGGGWNGGRGGWDREVNPFTDEDSEPFSEQESSGINFD
AYEDIPVETSGDNVPPPVNTFADIDLGEAVNENIRRCKYVKPTPVQRHAIPISLAGRDLM
ACAQTGSGKTAAFCFPIISGIMRGHFPRPPRPRVAFPLALILSPTRELSCQIHDEAKKFS
YQTGVRVVVAYGGAPINQQLRELERGVHILVATPGRLVDLLERARVSLQMIRYLALDEAD
RMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQRLASDFLSSYIFLAVGRVGS
STDLIVQRVEYVQETDKRSHLMDLLHAQRENGVHGKQALTLVFVETKKGADSLEHWLCMN
GFPATAIHGDRTQQEREYALRSFKTGHTPIMVATDVAARGLDIPHVAHVVNFDLPNDIDD
YVHRIGRTGRAGKTGLATAFFNENNSSLAKSLSDLMTEANQEVPAWLSRFAARSNYGGKS
RRGGGRFGGRDFRRDSSYNRGAADYYGGANMNSGYASGGYSSYGAAGVTSAWD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgtcgtgggctgattctgtttctgcagccgagaatccggctggtgctgcgtcc
aagtcagcatatgttccaccacatctaagaaacagaccgtcgatagaacctcctgcacag
gcttcgtatgctggtgctgctgcattaggtaatgaccacagtggttatggtgtcccaaat
gtggttggcagtcgttggagtggtcaaaggactgaaaaccgatctggttatgttggtgga
ggaggacgtggtggtggttggaatgggggacgtggtggttgggatcgtgaggttaacccc
tttacggacgaagatagtgaaccctttagtgaacaagagagttctgggatcaatttcgat
gcatatgaggatattccagtggaaactagcggggataatgtgccccctcctgtgaatact
ttcgcagatattgatttaggtgaagctgtcaacgaaaatattaggaggtgcaagtatgtt
aagccgacccctgtgcaacgacatgctatacctatttcacttgcggggagggatttgatg
gcttgtgctcaaactggttctggaaaaactgctgctttctgcttccccattataagtgga
atcatgaggggccactttcctagacctccacgtccacgtgtggcatttcctctagctctt
attctctccccaacgagggagctctcatgccaaattcatgatgaagctaaaaaattttca
tatcaaactggcgtcagggtggttgttgcctatggtggtgctcctataaaccaacagctt
cgagaattagagagaggtgtgcatattcttgtggcaacccctgggcggttagttgattta
cttgagagagcaagagtctcgttgcagatgataaggtatttggctctagacgaggcagat
cgaatgcttgatatgggttttgaacctcaaataaggaaaatagtgcaacagatggacatg
cctccgccaggtgtacgacagaccatgctgttcagtgccactttcccaaaagagattcag
agactagcctcggattttctatccagttatatctttttggctgtgggaagggtcggctct
agcacagatttgattgtccaaagagttgaatatgttcaagagactgacaagagaagtcac
ttgatggatcttcttcatgcacagagggaaaatggtgttcatggcaagcaagctcttacc
cttgtttttgtggagactaagaagggagccgattcactggagcattggctttgtatgaat
ggtttccccgctactgctattcatggcgatagaactcagcaggaaagagaatatgccctg
agatccttcaaaactggtcacacaccaattatggttgcaacagatgtggcagcacgtggt
ctcgatatcccccacgttgcacatgttgtcaactttgacctgccaaatgacattgatgac
tatgtgcaccgtattggaagaacaggacgagcaggaaaaacgggtttagctactgctttc
ttcaacgagaacaattcttcattggcaaaatcactgtctgacttgatgacagaagcaaac
caagaagtacctgcttggctctctcgctttgctgctcgatctaactatggagggaaaagt
cgacgtggtggaggtcgttttggtggtcgtgactttcgaagagattcctcttacaatcga
ggcgctgcagactattatggtggtgccaatatgaacagcggatatgcatctggggggtat
tcatcatatggagcagcaggtgtgactagtgcatgggactaa
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