KEGG   Nicotiana tabacum (common tobacco): 107793377
Entry
107793377         CDS       T04643                                 
Name
(RefSeq) ras-related protein RABF2a
  KO
K07887  Ras-related protein Rab-5A
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04144  Endocytosis
nta04145  Phagosome
nta04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:nta00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107793377
   04145 Phagosome
    107793377
   04148 Efferocytosis
    107793377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nta04131]
    107793377
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nta04147]
    107793377
   04031 GTP-binding proteins [BR:nta04031]
    107793377
Membrane trafficking [BR:nta04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    107793377
 Endosome - Lysosome transport
    107793377
Exosome [BR:nta04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107793377
  Exosomal proteins of other body fluids (saliva and urine)
   107793377
  Exosomal proteins of colorectal cancer cells
   107793377
  Exosomal proteins of bladder cancer cells
   107793377
GTP-binding proteins [BR:nta04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    107793377
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase Gtr1_RagA MMR_HSR1 AAA_24 ABC_tran
Other DBs
NCBI-GeneID: 107793377
NCBI-ProteinID: NP_001312491
UniProt: A0ABD8ELI6 Q40570
LinkDB
Position
Un
AA seq 200 aa
MATSGNKNMNAKLVLLGDVGAGKSSLLLRFVKGQFIEFQESTIGAAFFSQTVAVNDATVK
FEIWDTAGQERYHSLPPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL
AGNKADLLDARKVAAEEAQTYAQENGLFFMETSAKTASNVNDIFYEIANRLPRLQPAQNP
SGMVLMDRPAQTPASASCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcaaccagtggaaacaagaatatgaacgccaaattggtgcttcttggagatgttgga
gctggaaaatctagtctcctcctgcgttttgttaaaggacaatttattgaatttcaggaa
tcaactattggtgccgcatttttctcccaaacagtagcagtaaatgatgcaactgtaaaa
tttgaaatatgggacacagcaggccaagagagataccacagtcttcctccaatgtactat
agaggagctgcggctgctataattgtttttgatatcacaaatcaagcatcatttgataga
gcaaaaaagtgggttcaggagcttcaggcacaaggtaatccaaatatggtgatggcactt
gcggggaataaggcagatttgttagatgcaagaaaagtggctgcagaggaagcacaaaca
tatgcccaggagaatggtcttttcttcatggaaacatctgcaaaaactgcatctaatgtt
aatgacattttctatgaaatagcaaatagactgcctcggcttcagccagcacaaaatcca
tctgggatggttcttatggataggcctgctcaaaccccggctagtgcttcttgttgctct
taa

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