Nicotiana tabacum (common tobacco): 107793685
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Entry
107793685 CDS
T04643
Name
(RefSeq) RNA-binding protein Y14A-like
KO
K12876
RNA-binding protein 8A
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107793685
09122 Translation
03013 Nucleocytoplasmic transport
107793685
03015 mRNA surveillance pathway
107793685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107793685
03041 Spliceosome [BR:
nta03041
]
107793685
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107793685
Spliceosome [BR:
nta03041
]
Complex C
Other components
EJC/TREX
107793685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
107793685
NCBI-ProteinID:
XP_016471562
UniProt:
A0A1S4A4G2
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All DBs
Position
8:complement(37757064..37762784)
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AA seq
193 aa
AA seq
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MANAEEAVDFEPEEDDLMDEDVDASSPRASIPKLKSAITGGGSSASKKTKGRGFREEAAE
AERNARLSARFDSLDTDGGPGPERSIEGWIVLVTGVNEEAQEDDLHNEFGEFGEIKNLHL
NLDRRTGFVKGYALIEYENFEEAERAINEVDGKELLTQPIHVDWAFSKGPFRRRNARRRS
PRSHRSRSPRRRL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcggaagaggcagtggatttcgagccagaggaagacgatctgatggacgaa
gacgttgacgcttcgtcgcctagggcttccattcctaagcttaaatcagccattactggc
ggcggctcttctgcttctaaaaaaaccaaaggtcgtggtttccgtgaagaagctgctgag
gctgaacgcaatgctcgcctctctgctcgatttgattctctcgacaccgatggtggccct
ggacctgaacgctccattgaaggatggattgttttagttactggagttaatgaagaggca
caagaagatgatcttcataatgaatttggtgagttcggggagatcaagaatttgcattta
aatctggatcgtcgtactggatttgtcaagggttatgcacttattgaatatgaaaacttt
gaagaagcagagagagctatcaatgaagtggatgggaaagagctgctcactcagccaata
catgttgattgggcattcagcaaaggtccttttaggaggagaaatgctaggaggaggtcg
ccacgcagtcatcgttctagaagtcccaggaggagattgtaa
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