Nicotiana tabacum (common tobacco): 107793762
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Entry
107793762 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 53-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107793762
03036 Chromosome and associated proteins [BR:
nta03036
]
107793762
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107793762
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Helicases
107793762
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107793762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107793762
NCBI-ProteinID:
XP_016471675
UniProt:
A0A1S4A4Z1
LinkDB
All DBs
Position
Un
AA seq
633 aa
AA seq
DB search
MASLSTPLRYSKMNSLFLLRNTSSSLTSKRVTLNSISHIFSTDKFIPRNALKVSQIHSFT
TSVTPSAAVSNWVNGNFGYSVRAFNVAATAFADLEEECDVDNGVGLEISKLGISEEIVSA
LAQRGITSLFPIQKAVLEPAMQGSDMIGRARTGTGKTLAFGIPIMDKIIKFNNKKGRGRN
PLALILAPTRELARQVEKEFYESAPVLDTLCVYGGVPIQRQMSTLQRGADIVVGTPGRII
DLLKRGSLNLSEIQFVVLDEADQMLNVGFAEDVETILENVRQKHQTMMFSATMPSWIMKI
TNKFLKKPIHIDLVGDSDQKLADGISLYSIACEMRQKPAVLGPLISEHAKGGKCIVFTQT
KRDADRLASSMQKTLRCEALHGDITQSQRERTLSGFRQGQFNVLVATDVAARGLDVPNVD
LVIHYELPNSSEIFVHRSGRTGRAGKKGSAILMHSSKQHRDVKGIEHDAGCRFTELPSIK
VEAGAADMYSDMGKGSDRFGSYGGTMRSRSGDFGGGRSGGYGNKGSRFGGEGASSSRTGG
YSGTGSGRSGGGYGGTSSGRSGKFGGSGGSKRLGGFRNFGSGRSSRFGDSQSDRNNRSSR
FDDFGDGKDSGDQSSGRNSISRRRAPWDFSINR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctctccactcctttaagatacagcaaaatgaatagtctttttctactgaga
aacacttcatcttcactaacctcaaaaagggtcaccttaaattcaatttcccatatcttt
agtactgataaattcattccaagaaatgctcttaaagtttcacaaattcacagctttacc
acttctgtaactccatcagcagcagtgtcgaattgggttaatggtaattttgggtatagt
gtgagggcatttaatgtggctgctactgcatttgcagatttagaagaagagtgtgatgtt
gataatggggttgggcttgagatatcaaagcttggtatttctgaggaaattgtttctgct
ttggctcaaaggggaattacttctctttttcctattcagaaagctgttttggaaccagca
atgcaggggtcggacatgattggccgagctagaactggaactggaaagacactagctttt
ggcattcctatcatggataagatcatcaaattcaacaataaaaaaggacggggaagaaac
cctttggcattgatcttggctcccactagagaacttgcacggcaggtggagaaagaattt
tatgagtctgctcctgttttggatacgctatgtgtttatggtggtgtccccattcaacgc
caaatgagtactcttcaaaggggtgcagacattgttgttgggacacctggtcggatcatt
gatctgctgaagagggggtccttgaatttatcagaaatccagttcgttgttctagatgaa
gctgatcagatgcttaacgtgggcttcgcggaggatgttgaaaccattcttgaaaatgtt
cggcagaaacatcagacgatgatgttttcagccacaatgccaagttggataatgaaaatt
accaacaagttcttgaagaagccaattcacattgatcttgtaggggattctgaccagaaa
ttagccgatggaatttccttgtattcaattgcttgtgagatgcgtcagaaaccggcagtt
cttggacccttaatatcagagcatgcaaaaggaggcaagtgtattgtctttactcaaaca
aagcgtgatgctgataggttggcgagttcaatgcaaaaaactttgagatgtgaagctttg
catggggatatcacacaaagccagagggagagaactctgtccggttttcgacaaggtcaa
ttcaatgtattggtggccactgatgttgctgctcgagggcttgatgtacctaatgttgat
ctggtgatacattacgaacttccaaactcttcagagatctttgttcatcgatctggtcga
actggacgtgctgggaagaaaggaagtgccattctcatgcattcctcaaagcagcatagg
gatgtgaaaggtattgagcatgatgccggatgcagatttactgagctcccaagtattaaa
gtagaggctggagcagcagacatgtatagtgacatgggcaaaggcagcgaccgctttggt
tcctatggaggcaccatgcgtagtcgatctggtgattttggtggaggtcgttctggtggc
tatggaaataaaggcagcaggtttggtggagaaggcgcttcatcttctcgaacaggtgga
tacagtggaactggttcaggaagatcagggggtggctatggtggaactagctcgggccgc
tcaggaaagtttggtggttctggaggctcaaaacgtttgggtggtttccgtaattttggt
tcgggccgttctagtagatttggagattcacagtctgaccgcaataaccgttcaagccgt
tttgatgacttcggagatggcaaggatagtggtgatcagagttcagggaggaactccatt
tcaaggaggcgtgccccctgggacttctccattaatagatga
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