Nicotiana tabacum (common tobacco): 107794035
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Entry
107794035 CDS
T04643
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107794035
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107794035
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107794035
NCBI-ProteinID:
XP_016471978
UniProt:
A0A1S4A5Q0
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All DBs
Position
Un
AA seq
434 aa
AA seq
DB search
MGTLKNRSIFFVSVTLVLSIEANISEFDEVWQTRATQAKKTAQDSYNPHPETVADNLNKH
VHTSEEGSNSTRRDLHKYNGPCMSTNPIDRCWRCDPNWAKTRMKLADCVLGFGHHTTGGK
GGKIYIVTDPSDDDMVNPKPGTLRHAVIQPEPLWIIFKHHMVIRLNQELIMTSNKTIDAR
GQQVHIAFGASFMLQFINNVIIHGLHIHDIKAGNGGLIRDSINHYGFRSRSDGDGISIFG
STNIWIDHVSMSNCDDGLIDAVQASTAITISNCHFTNHNDVMLFGASDSYSEDSILQITL
AFNHFGQGLIQRMPRVRWGFVHAVNNDYTHWLMYAIGGSQHPTILSQGNRFIAPPNPNAK
EVTKREYSPESVWKNWVWRSQGDLMMNGAFFVESGNPNHIFMKGPDMIHPRPGSYASRLT
RFSGSLNCIEGKPC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggaactctcaaaaataggtcgattttctttgtttcagtcactctagttttaagcata
gaggccaatattagtgagtttgatgaggtgtggcagactcgagctacgcaagcaaagaaa
actgctcaggattcctataatcctcatcctgaaaccgtcgcagacaatctcaacaaacat
gttcacacgtcggaagaaggtagcaatagcacaaggagagacttgcacaagtacaatggt
ccatgcatgtctactaaccctattgatcgttgctggagatgtgacccaaactgggctaaa
acccgcatgaagctagctgattgtgttcttggattcggccaccatacaactggtggcaaa
ggtggcaaaatctacatagtaactgacccttcagacgacgatatggtgaatcctaagcca
ggaacactgcgccatgcagtcattcaaccagagccactttggatcatatttaaacatcac
atggtcattaggcttaaccaggaacttatcatgacaagcaacaagacaattgatgccaga
gggcaacaagtacacattgcctttggtgctagtttcatgttacagttcattaacaatgtg
attattcatggtcttcatatccatgatattaaggctggtaatggtggcctaatcagagac
tcgattaatcattatggttttcgatcaagaagtgatggtgatggtatttcaatctttgga
tccacaaatatttggattgatcatgtttccatgtctaattgtgatgatggactcattgat
gctgtccaggcttcaactgctattaccatttccaactgccatttcactaaccataatgat
gttatgttgtttggagcaagtgatagctactcggaggactcaattttacagataacactt
gcttttaatcactttggacaaggattgatccagaggatgccaagagtgagatggggattt
gttcatgcagtcaacaatgattacactcactggctaatgtatgcaattggtggaagccaa
caccccaccatcctcagccagggcaaccggttcatcgccccgcctaaccctaatgcaaag
gaggtgaccaaaagggagtattcacctgaaagtgtgtggaagaattgggtgtggagatca
cagggagatctgatgatgaacggagcgttctttgtggaatctggaaatcccaatcatata
ttcatgaagggtcctgatatgatccaccctaggccaggatcatatgcaagcaggctaaca
agattttcaggctctttgaactgcattgaggggaagccttgttag
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