KEGG   Nicotiana tabacum (common tobacco): 107794083
Entry
107794083         CDS       T04643                                 
Symbol
Rab5b
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04144  Endocytosis
nta04145  Phagosome
nta04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:nta00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107794083 (Rab5b)
   04145 Phagosome
    107794083 (Rab5b)
   04148 Efferocytosis
    107794083 (Rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nta04131]
    107794083 (Rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nta04147]
    107794083 (Rab5b)
   04031 GTP-binding proteins [BR:nta04031]
    107794083 (Rab5b)
Membrane trafficking [BR:nta04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    107794083 (Rab5b)
 Endosome - Lysosome transport
    107794083 (Rab5b)
Exosome [BR:nta04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107794083 (Rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   107794083 (Rab5b)
  Exosomal proteins of colorectal cancer cells
   107794083 (Rab5b)
  Exosomal proteins of bladder cancer cells
   107794083 (Rab5b)
GTP-binding proteins [BR:nta04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    107794083 (Rab5b)
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 107794083
NCBI-ProteinID: NP_001312501
UniProt: I6LFS7
LinkDB
Position
Un
AA seq 200 aa
MGCASSVADRNSGRAAGLNPDNGGAVDPKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES
FAKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVTTQDGIDCAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRPAAA
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggttgcgcatcttcagttgcagatagaaattcgggacgggctgctggccttaatcct
gataatggtggagcagttgaccctaaaaatcttaaagtgaagctggtactcttgggtgat
tctggtgttggtaaaagctgtattgttttgcgctttgtccgtggtcaatttgatccaaca
tctaaggtgactgtaggagcttcttttctgtctcaaacaatagcgttgcaggactcaact
acagttaaatttgaaatatgggatacagcgggtcaagagaggtacgcagcacttgcacca
ctgtactaccgaggtgctgcagttgcagttgttgtgtatgatattactagtcctgagtct
tttgccaaagcacaatactgggtcaaggaattacaaaaacatggaagccctgatattgtc
atggctctagttggcaacaaagctgatctccacgaaaaaagagaagtaacaactcaagat
gggattgactgtgctgaaaagaatggcatgttctttatagaaacatctgctaagacagct
gataatatcaaccagttgtttgaggaaattgccaagagattaccacgcccggctgctgct
tga

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