Nicotiana tabacum (common tobacco): 107794426
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Entry
107794426 CDS
T04643
Name
(RefSeq) RING-H2 finger protein ATL43-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107794426
Enzymes [BR:
nta01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107794426
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107794426
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_1
Rtf2
zf-RING_16
zf-RING-like
Prok-RING_4
RINGv
zf_RING_Vps8_fungal
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
107794426
NCBI-ProteinID:
XP_016472399
UniProt:
A0A1S4A716
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All DBs
Position
9:15527434..15530072
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AA seq
450 aa
AA seq
DB search
MGMIFNVHFLLPSLWLFFFFLNTPQTITYAQIAQTPFSSTPFLTTPPPQPPTPYRSRESP
FRPSIAVVVAILTTIFSITFLLLLYAKHCKRGPFGTTTTTAAYGGGGVPPRSSFRKNSGI
DRTVIESLPVFRFGSLRGPKAEALECAVCLNKFENSEILRLLPKCKHAFHVECVDTWLDA
HSTCPLCRYKVDPEDILLISHENNGPQLERKSFSNSTSSSPAKENKRIYSSGRHSSAGER
GSSSLQIIVETPKEENGGTASFLNKRMSLDSWNFYKKKCKSTNSISSRRKDTMLLPAPEK
NNHRIDAAEDVAEQRRLEHRIIIYGDESEDRSASGAQYRWSDVEACDMLFLRSEMILSES
RRYSGSRKWTAEIERRNCNSNSGSGRGVINERSVSEMTGMSRFRSNEDERGRQLERQRQR
RGAVTRWLDWISKSQSLSLPAAPSSTCSAT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgattttcaatgttcattttcttttgccttctctctggctcttcttcttcttc
ttgaacactcctcaaactattacctatgcacaaattgctcaaaccccattttcttctaca
ccatttttaacaaccccaccaccccaacctcccaccccatatagatctagagaatcacca
tttagaccaagcatagcagtagttgtagcaattctcacaacaattttttccatcacattt
ttattactcttatatgcaaaacattgtaagaggggtccattcggaaccaccaccaccact
gccgcctacggcggaggaggagttccgccgcggtcaagcttcagaaaaaactctggtatt
gaccgtacggtgattgaatctttacccgtttttagattcgggtctctcagggggcctaaa
gcagaggctttggaatgcgctgtttgcttgaacaaattcgaaaacagtgaaatcctacgg
ttattacccaaatgcaaacacgcatttcacgttgagtgtgtggatacttggcttgatgca
cattccacgtgtcctctttgtcgttacaaagttgacccagaagatattcttcttatctca
catgaaaataatggtccccaattagagagaaaatctttttcaaattctacgtcatcatcg
ccggcgaaagaaaacaagaggatttattcgtcgggaagacattcgtcggccggagaaaga
ggaagttcgtcgttacagataatagtagaaactccaaaagaggaaaatggtggaacggcg
tcgtttttgaataaaagaatgtcgttagacagttggaatttttacaagaaaaaatgtaag
tccactaactcaatatcatcaaggagaaaagatacgatgttattaccggcgccggaaaaa
aataaccaccgtatagatgcggcggaggatgtagcggagcaaaggcggctggaacaccgg
ataataatttatggggatgaatcagaggacaggtcagcaagtggggcccaatatagatgg
agtgacgtggaagcttgtgatatgttgtttttacggtcggagatgatattgagcgagagc
cgtagatattcggggtcgagaaaatggacggctgagattgaaagaagaaactgtaatagt
aatagcgggagtggcagaggagtaataaatgagagaagcgtgtcggaaatgacaggtatg
agtaggtttaggagcaatgaagatgaaagaggaagacaattagagagacaaagacaaaga
agaggagcagtaacgaggtggttggattggatttcaaaatcacaatctctgtctttgcca
gctgcaccttcttctacttgttctgcaacttga
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