Nicotiana tabacum (common tobacco): 107794577
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Entry
107794577 CDS
T04643
Symbol
GTBP1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107794577 (GTBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107794577 (GTBP1)
03041 Spliceosome [BR:
nta03041
]
107794577 (GTBP1)
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107794577 (GTBP1)
mRNA cycle factors
Common to processing body (P body) and stress granule
107794577 (GTBP1)
Spliceosome [BR:
nta03041
]
Common components
Common spliceosomal components
hnRNP proteins
107794577 (GTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
BRAP2
Motif
Other DBs
NCBI-GeneID:
107794577
NCBI-ProteinID:
NP_001312516
UniProt:
E2F3S8
LinkDB
All DBs
Position
Un
AA seq
346 aa
AA seq
DB search
MGSRKNDFGDGASPGKIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGF
ITYSDPTVVDTVIAETHIINDKQVEIKRTIPKGSAESKDFKTKKIFVGGIPTSMNEDEFK
GFFSKYGKVVDCEIIRDHVSKRSRGFGFIVFDNELVVDNVLSEGNMIDMLGTQVEIKKAE
PKKPSNPASSGHGYGSESRGRGYSDSYGGFGNSYSSFGSGGFGPASYRSSGGMGGRFGDY
GYGGGEYGGRYGDFGGGEFGGYRGDPSLGYSSRYGSYAGGFGGGAGGYGGSGLMAYGRGA
SYGGYGGAGSGAGYDSGPGAGYGGPGGLYGSRAGYSGSGRYHPYAR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggttcacgaaagaacgacttcggcgatggagctagccccggaaaaatctttattgga
ggtctagcgaaagagacgacattagaacaatttgtgaagtactttgagaagtatggggag
ataatagactcggtgattatgaaggacagacatactggtagacctagaggttttgggttc
atcacttactctgatcccactgtcgttgacactgttattgctgaaacccatataatcaat
gacaaacaagttgagattaaaagaaccattccgaaaggatctgctgaatcgaaggacttc
aagaccaagaagatttttgttggtggcattcctacttctatgaatgaagacgaattcaag
ggcttcttctccaagtatgggaaggtggttgattgtgagatcataagggaccatgtgtct
aagcggtctcgagggtttggatttattgtgttcgacaatgagctagtagttgataatgtg
ctgtccgagggaaatatgattgatatgctgggtacccaggttgagatcaagaaggcagaa
cctaagaaaccctcaaacccagcatcatctggtcatggctatggtagtgagtctagggga
cgtggatacagtgatagttacggaggctttggcaattcatacagcagttttggcagtggc
ggttttggccctgcttcttataggtcttctggaggtatgggtggtaggtttggtgactat
ggatatggtggtggtgaatatggtggtagatatggagactttggcggtggtgaatttggt
ggctaccgtggagatccctcactcggctattctagtcgctatggctcttatgctggtggg
tttggtggaggtgctggtggatatggtggcagtggactaatggcatatggccgtggagct
agttatgggggttatggtggggctggctcgggtgctggttatgattctggccctggcgct
ggttatggtggaccaggaggtttatacggaagtagggcaggctatagtggcagcggccgt
taccatccctatgccaggtag
DBGET
integrated database retrieval system
