Nicotiana tabacum (common tobacco): 107795036
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Entry
107795036 CDS
T04643
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107795036
04121 Ubiquitin system [BR:
nta04121
]
107795036
Enzymes [BR:
nta01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107795036
Membrane trafficking [BR:
nta04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107795036
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107795036
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING-like
zf-ANAPC11
zf-RING_5
zf-RING_16
VPS18_RING_C
zf-C3H2C3
Pox_F15
Motif
Other DBs
NCBI-GeneID:
107795036
NCBI-ProteinID:
XP_016473087
UniProt:
A0A1S4A8W5
LinkDB
All DBs
Position
3:13204804..13206633
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AA seq
383 aa
AA seq
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MSSSYWCYRCTRFVRVSAGSDVVCPYCDSGFIEAAEASNIGSSPETRRRLNGRPESERSV
NMGSRRSRRNRGGDRSPFNPVIVLRSPSETLAGDDEAAGEERSYELYYDDGEGSGLRPLP
PTMSEFLMGSGFDRLLDQLAQIEVNGFGRPENPPASKSAIESMPILEIASHHVNTEEHCA
VCKEAFVLGSEAREMPCKHIYHTDCILPWLSLRNSCPVCRHEIPAESPETTTSGDFVRSR
NDEEAMGLTIWRLPGGGFAVGRFAGGRLGAERELPVVYTEMDGGFNNGVPRRIAWRSRRS
NTSRNGGGISRIFGNVASFFRRLSPSSQRRRALEIHSSSSDSSGSGSNVFRSRSVSSTSV
FSRYLRRSSRTWVPEESNGVTRW
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcgtattggtgttaccggtgtacgcgatttgttagggtttcagctgggagc
gacgttgtttgtccgtactgtgatagtggatttattgaagctgctgaggctagtaatatt
ggatcgtcgccggaaactcgccggcgattgaacgggcggccagaatcggaacgtagtgtt
aacatgggatctcgccggagccggcgtaatcgcggcggagacagatctccgttcaatccg
gttattgttcttcgtagtccgtcggaaactttagccggagatgatgaagctgcaggagag
gagcggagttacgagctttattatgacgacggcgaaggttctggtctccggccgttacct
ccgacgatgtcagagtttttaatggggtctggatttgaccggttgctcgatcagctagcg
caaatcgaggtgaacggatttggccggccggagaatccgccggcttcgaaatcggcgatt
gaatcgatgccgatcttagaaatagcatctcatcacgtgaatacagaagagcattgcgcc
gtttgtaaagaagcttttgttttaggctctgaagcacgtgaaatgccatgtaaacacatc
taccataccgactgtattctcccgtggctgtcgctacgcaattcgtgtcccgtctgccgg
cacgaaataccggctgaatcgccggaaactacaacctccggcgactttgttcgatcgaga
aacgatgaagaagcgatgggattgacgatatggagactccccggaggtggattcgccgtg
gggagatttgccggcggaagactgggagcggaaagagaacttccggtagtgtatacagaa
atggacggcgggtttaacaatggggtgcctagaagaatagcttggagatcaaggaggagt
aatacaagtcgaaatggcggtggaataagccgaattttcggcaatgttgcatcgtttttt
agaagattatcgccttcttctcaacggcggagagcgctcgaaatacattcgagcagctcg
gattcatccgggtccggatctaatgtttttcggagtcggagcgtttcaagcacttcagta
ttcagtagatatttgaggaggagcagtagaacttgggtaccggaagagagtaatggagta
accagatggtaa
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integrated database retrieval system
