Nicotiana tabacum (common tobacco): 107795803
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Entry
107795803 CDS
T04643
Name
(RefSeq) protein CHROMATIN REMODELING 5-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107795803
03036 Chromosome and associated proteins [BR:
nta03036
]
107795803
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
107795803
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
107795803
SLIK complex
107795803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
107795803
NCBI-ProteinID:
XP_016473989
UniProt:
A0A1S4ABE9
LinkDB
All DBs
Position
Un
AA seq
1710 aa
AA seq
DB search
MRRKCMAFYRNYSNETVILDEKSQGEQSMQGIHQDVGNEEVGGSLSENDDSGQLQDEVGV
EVEATVGDQVLPGRRVNLAGKWGSGFWKDCQPIGPSGRSGSGEESKSGSEYKNEEESDEV
SDGREDQLESEDEGRQKEMGKSRSVPADEMLSDEYYEQDGDDQSDSLHYRAANPSSGYSS
KPQSRSIAASKYASRKPKASKDQYNGEYADYDDDDSEDEDDPADPDYGSTGRGRGIKEKD
EDWEGGESDELNSDDDDVGISDEDEEYYRKPQGKQKNRGGHSVKSTREIRFLATSARRKR
GRTSYEEEESSEHDSENESEEDFGSKPRRVANLRPKNGGRSTAASVSGRNNELRTSSRRS
IRKVSYAESDESEEIDESKKKKGQKEEIEEEDGDSIEKVLWHQPKGMAEEARRNNKSADP
MLLSHLYDSEPDWNEMEFLIKWKGQSHLHCQWKSFVELQNLSGFKKVLNYTKRVMEDVKY
RKTVSREEIEVNDVSKEMDLDIIKQNSQVERVIADRISKDGYGNVVPEYLVKWKGLSYAE
ATWEKDVDIAFAQDAIDEYKAREAATMVQGKSVDFQRKKSRGSLRKLEEQPEWLKGGKLR
DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTL
SNWAKEFRKWLPDVNVIVYVGARASREVCQQYEFYNDKKAGRTIKFDALLTTYEVLLKDK
AVLSKIRWNYLMVDEAHRLKNSEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFL
DPDKFKSKDDFVQNYKNLSSFNEMELANLHKELRPHILRRVIKDVEKSLPPKIERILRVE
MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDAF
GSTKLERIILSSGKLVILDKLLDRLHETKHRVLIFSQMVRMLDILAEYLSIKGFQYQRLD
GSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAM
SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGKLEKKETKKGS
LFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILDRAEKVEEKGAEAEEGNEL
LSAFKVANFCGAEDDASFWSRWIKPDAVGQAEESLAPRAARNIKSYAEASPLVETNKRKK
GVDAQERFPKRRKGDSNCMLPAIDGATAQVRGWSYGNLPKRDATRFSRAVKKFGNDSQIG
LISAEVGGAVEAAPTDAQVELFDSLIDGCREAVKGEVVDPKGPLLDFFGVPVKADELLGR
VEELQLLAKRISRYEDPVSQFRALSYLKPATWSKGCGWNQKDDARLLLGIHYHGFGNWEK
IRLNDKLGLMKKIAPVELQHHETFLPRAPQLKERASQLLQMEVAAVGGKNINLKVGRKAS
NKQKESLPSITTPLGKGKQGKLSSSGLNVKTGKVRASKAQKVEPLVKEEGEMSDNDEVYE
QFKEVKWMEWCQDVMADEEKTLKRLQRLQTTSADLPKDKVLAKIRNYLQLLGRRIDQIVI
EYEKEPYKQERMTVRLWNYVSTFSNLSGEKLRQIYSKLKQEQHVEARVGPSQFNGSAPGH
PTPGFIPRGLDVAKFEAWKRRKRAEADGHSQVQPQQQRPLTNGTRLSEPNSSSGILGAAP
SDSKQLGNGRPYRTLQSGLPQRPGFSSGPR
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagaaagtgtatggctttttataggaattattcgaatgaaactgttatattggat
gagaaaagccagggggaacagagtatgcagggtatacatcaggatgtaggaaatgaggaa
gtgggaggtagtttgagtgaaaatgatgatagcggtcagttacaagatgaagttggtgta
gaagtggaagcgacggtaggggatcaggtgctgcctggaagaagagttaatttggctggg
aaatggggttctgggttttggaaggattgtcaaccgattggcccctcgggtaggtcaggt
tctggagaggaatcaaagagtggatcagaatataagaatgaggaagaatcagatgaggta
tctgatggtagggaagatcagctagagtcggaagatgaaggaaggcagaaagaaatgggg
aagagtcgaagtgtccctgcggatgagatgttatctgatgaatattatgaacaagacggt
gatgatcagagtgactcgttacattacagagctgctaatccttcaagcgggtatagttca
aagccacagtcaaggtctattgccgccagcaagtatgcaagtcggaagccaaaagcttca
aaagatcagtacaacggcgagtatgctgattacgacgatgatgatagtgaagatgaagat
gatcccgctgatcctgactatggtagcacaggtcgtggaaggggcattaaggaaaaggat
gaagactgggaaggtggagagtctgatgagttaaacagtgatgatgatgatgtgggcatc
tccgacgaagatgaagaatattacagaaagcctcagggcaagcaaaagaataggggtggg
catagtgtaaaatctaccagagaaattaggtttcttgctacatctgctcgacgaaaaagg
ggtagaacatcatatgaagaggaagaatcatcagaacatgattctgaaaatgagagtgaa
gaggattttggaagtaaacctagaagagttgcaaatctccgcccgaaaaatggtggtaga
tctactgcggcaagtgtatctggcaggaataatgaactccgaacttcgagtcgtcgatct
attcggaaagtatcatacgctgagagtgacgaaagtgaagaaattgatgagagcaagaaa
aagaagggccaaaaggaagaaattgaagaggaagatggtgactcaattgagaaagtcctg
tggcatcagccaaagggcatggctgaagaagctagaaggaataacaaatcagctgatcct
atgttgttaagtcatttgtatgactctgaaccagattggaatgagatggagttcttaata
aaatggaaaggccagtctcatttgcattgtcaatggaagtcgtttgttgagctacaaaat
cttagtgggtttaagaaggttttgaattacaccaaaagggtcatggaggatgtgaagtat
cggaagactgtatcccgtgaggagatcgaggtaaatgatgtgagcaaggaaatggacttg
gatatcatcaaacagaacagtcaggttgagagagttatcgcagacagaatcagcaaagat
ggttatggtaacgtggtgccagagtatttagttaaatggaaagggctatcttatgccgaa
gcaacttgggagaaggatgttgatattgcttttgctcaagatgccatcgatgagtacaag
gctcgtgaggctgccactatggtacaagggaaatcagtggatttccagcggaaaaagagc
agaggaagtttgaggaagcttgaagagcagcctgaatggttaaagggtgggaaacttcga
gattatcagcttgaaggcttgaattttctggttaacagttggaggaatgatactaatgtt
atattagctgatgaaatgggtctgggtaaaactgttcagtctgtttcaatgctcggtttt
ctacagaatgctcagcaaattcatggaccatttctggttgttgtcccattatcaaccctc
tccaattgggcaaaagaatttaggaaatggctgcctgatgtgaatgtgattgtctatgtt
ggagcacgtgcaagtcgtgaggtttgtcaacaatatgaattctacaatgataagaaagct
ggcaggactatcaaatttgatgcgctgcttaccacttatgaggtactattgaaggacaag
gcagtgctttcaaagataaggtggaattaccttatggttgatgaagcacataggttaaag
aatagtgaggcttctctttatacaacgcttttggagtttagcacgaaaaacaagctgctc
atcactggtactccattgcagaacagtgttgaagaactatgggccttactccacttcctt
gatcctgataagttcaagagcaaggatgattttgttcagaattataagaatcttagttcg
tttaatgaaatggagcttgcaaatcttcacaaggaattgaggcctcacattctcaggagg
gtcataaaagatgtggagaagtcacttcctcctaagattgaacgaattcttagggttgag
atgtcaccgcttcagaaacagtattacaaatggatcttggaacggaattttcatgatttg
aataaaggtgttcgcgggaatcaggtttcacttttaaatattgtggtggagttgaagaaa
tgttgcaatcacccatttttatttgaaagtgcggaccatgggtatggtggggatgcattt
ggcagcacaaaattggaaagaattatactcagcagtggtaagcttgttatactcgacaag
ctgctggacagattgcatgagacgaagcaccgagtgttgatattttctcagatggttagg
atgctggatatactggcagaatatttgtctatcaaagggttccaatatcagcgacttgat
ggtagtactaaggctgagttacgccatcaggctatggaccactttaatgcacctggtagt
gaagacttctgttttcttctctcaacacgagctggtggattgggtataaatcttgcaaca
gcagacacagttatcatttttgattctgattggaatccccaaaatgacttgcaggcaatg
agtagagctcataggatagggcagcaagaagttgtcaacatctacagatttgttacaagt
aaaagtgtggaggaagatattctggaacgggctaagaagaagatggttcttgaccatttg
gtgattcagaaactgaatgcggagggtaaattagagaagaaagaaaccaagaaaggaagt
ctctttgataagaatgagctctctgcaatcttgaggtttggggctgaggaactatttaag
gaagacaagaatgatgaagagagcaagaagaggcttcttagtatggatattgatgaaatt
cttgaccgggctgaaaaggttgaagagaaaggagctgaggcagaggaaggaaatgagttg
ctgagtgcattcaaggttgccaatttctgtggtgctgaagatgatgcatctttttggagt
cggtggataaagccagatgctgttggacaagctgaagagtctttggctcctcgagctgct
cgaaatataaagagttatgcagaagctagccctctggtagaaactaataaaagaaagaag
ggtgttgatgctcaggaaaggttcccaaaacgtcgcaagggagattctaactgcatgctt
ccggcaattgatggtgctaccgctcaagtgagaggatggtcttacgggaacttgccaaag
agagacgccactcgtttttcccgtgcggtcaagaagtttgggaatgatagccaaattggc
ttaatatcagcagaggttggtggggcagttgaagcggcgccaaccgatgctcaagttgag
ctttttgactcattaattgatggttgcagagaagcagttaaaggtgaagttgttgaccca
aaggggccacttttagatttttttggtgttcctgtgaaggctgatgaactactgggccgt
gtcgaggaacttcaacttctagcaaagcgtatttctcggtatgaggatcccgtctcacag
ttccgtgctttgtcttatctaaaacctgcaacttggtctaaaggttgtggttggaaccag
aaggatgatgccaggctgcttttgggaattcattatcacggatttggcaattgggaaaag
atacggttaaatgataaactgggcctcatgaagaagattgctccagtggaacttcaacat
catgagactttcttgccaagagctccgcagttgaaggagagagcttctcaacttctgcaa
atggaagttgcagctgttggtgggaagaacataaatttaaaagtgggccgtaaagcttcc
aacaagcagaaggaaagccttcccagtatcacaacacctcttggaaagggtaaacaaggt
aaactaagctcatccggattaaatgttaaaacaggtaaagtcagagcttcaaaagcccag
aaggttgaacctttggttaaagaggaaggggaaatgtcagacaatgatgaagtttatgag
cagtttaaagaggtgaaatggatggaatggtgccaagatgtgatggcagatgaggaaaag
acgcttaagcgtcttcaaagattgcagactactagtgctgatctcccgaaggacaaggtg
ttagccaaaatacggaactacttgcaacttcttggtcgcaggattgatcaaatagttatt
gaatatgagaaggaaccgtataagcaagaaaggatgacagtgcggttatggaattacgta
tcaacattctcaaatttgtctggcgagaagcttcgtcagatttattctaaacttaaacag
gagcaacacgtagaagcaagggtaggaccttcacaatttaatggttctgcacctgggcat
ccaacgccagggtttataccccgaggtttagatgtggcaaaatttgaagcatggaaacga
aggaaaagagctgaagctgatggtcattcccaagttcagccccaacagcaaagacctttg
actaatgggacacgcctatctgaaccgaactcatcttcagggattcttggcgcagctcct
tcagatagcaaacagttgggtaatggtaggccttacagaacacttcagtctggccttccc
caaagaccaggtttctcatctggtcccagatag
DBGET
integrated database retrieval system
