Nicotiana tabacum (common tobacco): 107795885
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Entry
107795885 CDS
T04643
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nta03000
]
107795885
03036 Chromosome and associated proteins [BR:
nta03036
]
107795885
Transcription factors [BR:
nta03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
107795885
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107795885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107795885
NCBI-ProteinID:
XP_075084298
UniProt:
A0AC58SH63
LinkDB
All DBs
Position
13:complement(95692795..95738768)
Genome browser
AA seq
1480 aa
AA seq
DB search
MEDEVEKLIEMEEQQQDVVEKASPSASDDSFINDDDDSDDGNQQSPHEEPLTDKEIEELI
AELLETESKAAEAQEALEEESIAKVEADVRAELAQSLSGDELEKAVADEMAIFKEDWENV
LDELETESAHLLEQLDGAGIELPSLYKWIESQAPNGCCTEAWKNRTQWVGSELTNDITGA
IADAEKYLQIHRPVRRRHGKVLEEGASGFLAKKLAGNDGSEAQGGSNDVDWGSFSKLCSD
NSSSSMGTISFGSKDWASVYLASTPQQAAELGLKFLGADEVEEIDDIEDSSVDPFVADAI
ANERELNLSEEQKRKYKKVKEEDDLKIDLKLRRRLKQRRHRNMQKLEEIQEDTTDDMSGS
LSQDVDFHTNRYSTIDDGDAPSSKCLPEIDSEAKGLKRLHNSEEMEAQSKKPRIITLDSD
EEDLPGEKLSPTCSLSETGDQSNPQRNGDDVLPVSSLPAFNEKQNFRCTACDKVAVELRA
HPLLKVIVCLDCKNSMKAKMQDVDCSECYCRWCGRCSDLLSCKSCKRLFCSVCIRRNLGE
ETLLGIKTSGWQCCCCSPSILHPLISELEKIMESQGLVDSSTDTDSDNSDASDADVNGHR
STKRRPKKKIRRILDDTELGEETKRKIAIEKERQERLKSLGAKYSSETMFMNSGACCKTS
YESGSLEMLGDVETGYIVNVVREDGEEAVRIPPSISAKLKAHQVAGIRFMWENIIQSIRK
VKSGDKGLGCILAHTMGLGKTFQVISFLYAAMRSVDLGLRTALIVTPVSVLHNWRQEFIK
WRPSELKPLRVFMLEDVPRERRAELLKKWTLKGGVFLIGYTAFRNLSFGKHIKDRHVARE
ICQVLQDGPDILVCDEAHIIKNTRADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF
VREGFLGSSHEFRNRFQNPIENGQHTNSTADDVKIMNQRSHILYEQLKGFVQRMDMNVVK
MDLPPKTVFVMSVKLSPLQRKLYKRFLDVHGFTKDKVSGEKIMKRSFFAGYQALAQIWNH
PGILQLMRENRACSKPEDAVENFLADDCSSDENTDYNTVPGEKLNSNSEALRKNHNGFLH
GDWWSDLLENNCKEVDYSGKMVLLLDILTMSSNVGDKALVFSQSLLTLDLIELYLSKLSR
PGKKGKYWKRRKDWYRIDGRTESSERQRLVDSFNDPLNRRVKCVLISTRAGSLGINLYAA
NRVIIVDGSWNPTHDLQAIYRAWRYGQTKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARV
VDRQQVHRTISKEEMLHLFEFGDDESSDIPLELKQAREHAGEANTTVDVGSVSKQKLTFP
NGSSTSDKLMQSLIDSHHPRWIANYHLHESLLQENEDEKLSKEEQEMAWEVYRRSIEWEE
RRISPDEPVAERQHVSTSESLPKQKPVVSTATLLPPEDSNLVFSMGSSRCRLVPRKCTNL
SHLLTLRSQGTKWGCSTVCGECAQEISWEGLNNRDGRSAK
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaagtggaaaaactcattgaaatggaagaacaacaacaagatgtagtagaa
aaggcttctccttctgcttccgatgattcttttattaacgatgatgatgattctgatgat
ggcaatcaacaatctcctcatgaggaaccattaactgataaggagattgaggagctcatt
gctgagcttttagaaactgagagtaaggctgcagaggctcaagaggctttagaagaagag
tcaatagctaaagtggaggctgatgttagggctgagttggcacaatctctttcaggagat
gagttggaaaaagctgtagctgatgaaatggcaatctttaaagaagactgggaaaatgtt
cttgatgaactggagactgagagtgctcatttgttggagcaactggatggtgctggtatt
gaactccctagtctctataagtggatagagagtcaggctcctaatggttgctgcactgaa
gcatggaaaaacaggactcagtgggttggttctgaattgacaaatgacatcactggagca
attgctgatgctgagaagtatcttcagatccacaggcctgtaagaaggcgacatggaaaa
gttttggaggagggtgccagtggtttcttggcaaaaaaacttgctggaaatgatggcagt
gaggctcagggagggagcaatgatgtagattggggctctttcagcaaattatgttctgat
aactcgtcatcatccatgggtaccatttcatttggcagcaaagattgggcctctgtttac
ctcgctagtaccccacaacaagctgctgaactgggactaaaatttcttggagcggacgag
gttgaggagattgatgatattgaagacagttctgttgatccatttgttgcagatgccatt
gcaaatgaaagagagctaaatctttctgaagagcaaaagaggaagtataagaaggttaaa
gaggaagatgatctaaaaattgatctgaagcttcggagacgtttaaaacaaagaagacac
aggaacatgcagaaattggaggagatacaggaagatacaacagatgacatgagcggttcc
ttgtctcaagatgttgactttcacacaaataggtattccactattgatgatggggatgcg
ccatcatcaaaatgcctacctgaaattgattctgaggccaaagggttgaaacgtttacat
aactctgaggaaatggaggctcaaagtaaaaagcctcggatcattacgttagatagtgat
gaggaggatcttcctggggaaaagttatctcctacatgcagtttgagtgagacaggagat
cagtccaatccacaaaggaatggagatgatgtgcttcccgttagttctcttccggcattt
aatgagaagcaaaattttcgctgcacggcttgtgataaagtggctgttgaactacgtgca
catcctcttttgaaagttatagtttgcctggactgcaaaaactcaatgaaagcaaagatg
caggatgttgattgctcagaatgctactgcagatggtgtgggcgttgcagtgatctctta
agttgtaaatcgtgcaaacggttattttgtagtgtgtgtataaggaggaaccttggtgaa
gaaactttattgggaataaaaacatctggttggcaatgctgctgttgctccccaagtatc
ctgcatccattgatttcagagttggagaagatcatggaatctcagggattagtagattct
agcacagacacagattcagataattcagatgcttcagatgctgatgtcaatgggcataga
agcacgaagagaagaccaaaaaagaaaattagaagaatccttgatgatactgagttaggg
gaggagacaaaaaggaaaattgcaatagaaaaggaacgccaagaacgcctcaaatctctg
ggggcaaaatattcgagtgagactatgttcatgaattctggggcttgttgcaaaacctcg
tatgaaagtggtagcttagaaatgctcggtgatgttgaaactggttacatagttaatgtg
gtgagggaggacggggaagaggcggtgaggattccacccagcatctcagcaaaactgaaa
gcccaccaggttgctgggattcgttttatgtgggaaaatattattcaatctatcaggaaa
gtcaagtctggagataaaggccttggttgcatcctagctcatactatgggtctaggcaaa
acatttcaggtgatttctttcttgtatgccgctatgagaagtgtggatttaggattgaga
actgctctcatagtcacgcctgtaagtgttctgcataactggcggcaggaatttataaaa
tggagaccatcagaattgaagcctctccgtgtctttatgcttgaagatgttccaagggag
agaagggccgagttactaaaaaaatggacattaaaaggtggtgtattcttaattggctat
actgctttcagaaatttgtcatttgggaagcatataaaggatcgtcacgtggccagagaa
atttgtcaagtccttcaggatgggcctgatatacttgtttgtgatgaggctcatattatc
aagaataccagagctgatgtaactcaagccttgaaacaagtcaagtgccagagaaggatt
gcattaactggatctcctcttcaaaacaatttgatggagtactactgtatggttgatttt
gtaagagaaggatttcttggcagcagtcatgaatttagaaaccgctttcagaatccgata
gaaaatggtcaacacaccaattctacagctgatgatgttaaaattatgaatcagcgatct
catattctctatgagcaattaaaaggatttgttcaaagaatggacatgaatgtcgtaaag
atggatttgccgccaaaaactgtgtttgtgatgtctgtaaagctttctcctctacagcga
aaattgtataaaagatttctagatgttcatggcttcacaaaagacaaggtctctggtgag
aagataatgaaaagatccttttttgccgggtatcaagccttggctcagatatggaaccat
cctgggattttgcaactgatgcgagaaaacagagcctgtagtaagcctgaggatgctgtt
gagaattttcttgctgatgattgctcaagtgatgagaacacagattataatactgttcct
ggagagaagctgaatagcaacagtgaagctctcaggaaaaatcataatggcttccttcat
ggggattggtggagcgatcttctagaaaataattgcaaagaagttgattatagcggcaaa
atggttctgctactcgacatcctgacaatgagctccaatgttggtgacaaagcacttgtg
tttagtcagagcttgttaactttggatctcattgaactatatctttcaaaactatcgcgc
ccagggaaaaaggggaagtactggaagcgacggaaagactggtacaggattgatggaaga
acagaatcatctgaaaggcagagacttgttgatagttttaacgacccattaaatagaagg
gttaaatgcgttttaatatctactagagctggatctctgggtatcaacctttatgctgct
aaccgtgtaattatagttgatggctcttggaatccaactcatgatcttcaagctatatat
cgagcttggaggtatggtcaaacaaaacctgtttttgcttatcgtttactggcacatgga
acgatggaggagaagatatacaagcgtcaggtaacaaaggaaggtcttgcagcacgggtg
gtcgacagacaacaagtacatagaactatatccaaagaggaaatgttgcatctttttgaa
ttcggagatgatgaaagctctgatatacctctggagttgaagcaagcaagagaacatgct
ggtgaagcaaacacaactgtagatgttggaagtgtttcgaaacaaaagttaacctttcca
aatggaagctctacttctgacaagctaatgcaaagtttgattgacagccatcatccacgt
tggattgcaaattatcatttgcacgagagtctcttgcaagagaacgaggacgaaaagcta
tcaaaagaagagcaggaaatggcgtgggaagtgtaccggagatctattgaatgggaagag
aggcgaatttctcctgatgaacccgtagctgagcgtcagcatgtctctacttctgaatca
ttgccaaagcaaaagccagtggtttccaccgccacccttttgccgccagaggacagtaat
cttgtattttcaatggggagttcaagatgccgtttggtaccaaggaagtgcacaaacttg
tcacatttgcttacacttagaagtcaaggaaccaaatggggttgtagcactgtttgtggg
gaatgtgctcaggagataagttgggagggccttaacaacagggatggcagatcagcaaag
tga
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