Nicotiana tabacum (common tobacco): 107795931
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Entry
107795931 CDS
T04643
Name
(RefSeq) RNA polymerase sigma factor sigA-like
KO
K03086
RNA polymerase primary sigma factor
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107795931
Transcription machinery [BR:
nta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
107795931
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
AVEN
Motif
Other DBs
NCBI-GeneID:
107795931
NCBI-ProteinID:
NP_001312542
UniProt:
Q9SLX4
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All DBs
Position
6:complement(153940824..153947238)
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AA seq
508 aa
AA seq
DB search
MMSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSP
SCVSSRKSQSAKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSMLE
KQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPL
RSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPS
DDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGGLI
GLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKARL
EEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADNH
LENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSRER
VRQVGLVALEKLKHAARKRQLDAMLIKQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccacagcagcagttattggactcagtgcaggaaaaagactcctcagctcttcc
ttctattattccgatcttaatgaaaagctaacttgtaccagtgatcatagtttgccttgc
catcacgttccttccattaagaatgtgatcactgcgaagaagtcatccgattacagcccc
agttgtgtatccagtcgaaaatcacaatccgccaagtctcttaaagagcatgtggacatt
acagccgacccttctgatgtgccgtcctggtttgaaatgtatgaacaattgcaaaatgaa
agcgatgatgaggacgagtcggtggaggttctcctcttgctgcagaagtctatgcttgaa
aagcaatggaatctttctcttgagcagacattgacagcttctccgcaacatgaaaagaaa
agtaagaagatgcatattacttgctcagggacatctgctaggcggaggagaatggattct
cgacaaagagttcttgatcgacatagttcagctacaccaaccagtgcagcgaagccactg
agatcaattattggtccagagctacttcaaaatcgtttaaaaggttacgttaagggtgta
gtaagcgaagaactgctcacccatgctgaagtgcttcaactatccaaaaaaattcaagtt
ggcctttatttggaagagcagaaatccaggcttaaggaaagattgggatgcgagccttct
gatgatcaacttgctgtttccttgaaaatgtcacgtactgatctacaatctacattgatt
gagtgttccttggcaagagaaaggcttgcaatgagcaatgttcgtcttgtcatgtcaatt
gctcaaagatatgataacgtgggtgctgaaatggctgacctcgttcagggaggccttatt
gggctgcttcgtgggatagagaaatttgatccctctaaaggatacaaaatctcaacttat
gtttattggtggattcgccagggtgtctcgagagcgctggttgagaattcacgaacctta
agattgccaacatatctgcatgaaagactcagtctaatccgtaatgcaaaggcgagactt
gaagagaagggaataactccatctgtaaataatatagctgcatccctaaatatgtcccag
aagaaagtcagaaatgcaactgaggcaagcagcaagatgtattcacttgacagggaagca
tttccctctttaaatggtctccctggagaaacccttcatagttacatcgctgataaccat
ctggagaacaacccatggcatggtgtcgatgtatgggcactcaaggatgaagtaaacaac
ctcatttcatcaactcttagggacagagagagggagattatccgactgtactatggtctg
gacaatgaatgtctcacctgggaggatattagtaaaaggataggtttgtccagagaaagg
gtcagacaggtgggattagttgcacttgagaaactaaaacatgctgcaaggaaaaggcaa
ctagacgcaatgttgatcaaacagtga
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