Nicotiana tabacum (common tobacco): 107797017
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Entry
107797017 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107797017
KO
K14791
periodic tryptophan protein 1
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107797017
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
90S particles
Other 90S particles
107797017
Pre-60S particles
Other pre-60S particles
107797017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
PAC11
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_WDR41
MIOS_WD40
CFAP251_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
107797017
NCBI-ProteinID:
XP_016475334
UniProt:
A0A1S4AFD8
A0AC58UA98
LinkDB
All DBs
Position
3:182248386..182254771
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AA seq
494 aa
AA seq
DB search
MIAAISWVPKGVAKPVPAAAEPPSKEEIEELLKCGLLDKSEDSDNEEAEEDMNVDESKEN
EDDEVAVALAAANALGKATKDVSLGTDNITNGLKELNMENYDDEEDGIELFGSGLKDLYY
PSNDMDPYLKDKDNDSEEDEDMTIKPDDSIIVCASNDDDVSHLEIWILEVLSDGTVNMYV
HHEIIIPAFPLCTAWIDCPIKSDEGKGNFIAVGSMELAIEIWDLDILDEVQPAAVLGGIA
DIKKKGKKKTIKYKKDSHSDSVLGLAWNKEYRNMLASASADQSVKVWDVNTRSCTVTMND
HTDKVQAVAWNPFASQILLSGSFDHTVCMKDVRYPSHSGYKFPVSADVESLAWDPHSEHS
FVVSLENGTVTSFDIRAASSDSSSATKPSFTIHAHDKAVSSMSFNPLVPNLLATGSTDKM
VKLWDLSNNQPSCIASRNPKAGAVFSVSFSDDSPFFLAIGGSKGKLQLWDVSSEDAVLKK
YGKYVTQKGPLPKS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagctatttcgtgggttcccaaaggggttgcaaagccagttccagctgcggct
gagcccccttcaaaggaagaaattgaggagcttttgaagtgtggcctccttgataaaagt
gaagatagtgataatgaggaagctgaagaagatatgaatgttgatgaatccaaggaaaac
gaggatgatgaagttgctgttgcattagcagctgctaatgcacttggaaaagccacaaaa
gatgtctctctaggaaccgataacataacaaatggtttaaaggaattgaatatggaaaac
tacgatgatgaggaggatggcattgagcttttcggttcgggactcaaagacttgtactac
ccaagtaatgacatggacccatatctcaaggataaggacaatgactcagaggaggatgag
gacatgacaataaagcctgatgattctattatagtttgtgcaagcaatgatgacgatgtc
agtcatcttgagatctggattttggaagttttatcagatggtactgtaaacatgtatgtt
catcatgagattattattcctgcgtttcctctctgcacagcatggatcgattgccctatt
aaaagtgacgaggggaaagggaacttcatagctgtgggctcaatggaactagcaattgaa
atttgggacctagacatattggatgaggtgcaaccagctgctgtattaggtggaatcgct
gacataaagaaaaaggggaagaagaaaaccatcaaatacaaaaaggatagccactccgat
tcagtacttggtctcgcttggaacaaggaatacaggaatatgcttgccagtgctagtgct
gatcaatcagtcaaggtttgggatgtgaataccagaagctgtactgtcactatgaacgac
catactgacaaggttcaagcagttgcatggaatccatttgcatcacagattctcctgagc
gggtcattcgatcatacagtttgcatgaaggatgtgaggtatccatctcacagtggatat
aagtttccagtttctgctgacgttgaaagcttggcttgggatccacattctgagcattca
tttgtggtcagcttggagaatggtacagttactagttttgatatccgtgctgctagttct
gattcgagttctgcgacaaagccaagtttcaccatccatgctcatgataaagcagtgtcc
tcgatgtcctttaatcctctagtcccgaatcttcttgcaactggttccacggacaagatg
gttaaactatgggatttgagcaacaatcaaccttcttgtattgcatcaaggaatccaaaa
gccggagctgtcttctcggtttccttctcagatgattcccccttttttcttgctattggt
ggttctaaagggaagttgcagctatgggatgtttcttcagaagatgcggtgttgaagaaa
tatgggaaatatgtcacgcaaaaagggccgttgcccaaatcataa
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integrated database retrieval system
