KEGG   Nicotiana tabacum (common tobacco): 107797885
Entry
107797885         CDS       T04643                                 
Name
(RefSeq) uncharacterized LOC107797885
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107797885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    107797885
   03019 Messenger RNA biogenesis [BR:nta03019]
    107797885
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     107797885
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     107797885
SSDB
Motif
Pfam: NUFIP1
Other DBs
NCBI-GeneID: 107797885
NCBI-ProteinID: XP_016476291
UniProt: A0A1S4AI10
LinkDB
Position
Un
AA seq 678 aa
MFPGQNPRPQRPSQFQTNGVAPSAPLQIMGNPGSFMQNPMQIQPQMAIPNINSNTQFSPQ
QLFAFQMNQMNNVNSQQPKGQFVAQNIVNPPQFLNQNVAMQNLNQLLQLQMAMQMPGFAQ
VVPGNVPLYPNQVSQGMGLQNPNFAMNGHLGLMNASGTVQQSMNGNLSKQMADATRQLQG
QSPLMNSFGAVQHPQTQNFNIPASANSQISQGMVPQSSNFVMNAHMGPANANGVVQQSKN
GFPKQMPNATQQLQGQLPLMNPFGFVQQPQAQNFNTHASANTQGMGPQISNFAMNAQLGL
LNANGAVQQSMNGYEQMPNATQQLLGQLPLMNPFGVVQQPRTQNFNAPSSANAQVNPGCV
GGLNKSKGNQQNSYNSNFSKNQKHGAKSMKSQFGKGKFSTHNKSLEKGHHRNGEKKSNLA
NSVKPEMEKKRSLLVTYSAQEIRRWREERRKNYPSKSNLEKKITEKTAESDDSSCAAKLR
RQQLKEILAKQAELGCEVAEIPSSYLSDSEKQGDGREQKRPLSRKERFQKKFNKRERFNR
NDRFSKKRRFGNSDSSNTRDQNGSTAGQVTETAREPTLLQKLLSSDIRRDKRHLLQVFRF
MTMNSFFKDWPEKPLRFPQVVLKETGEEIEAAEEIYDAIDTTIKKSSNDSDNDDENNIAE
FTEAANELQENGSNSESE
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgttccctggtcaaaacccacggcctcagcgcccttctcagttccagaccaatggagtt
gctccttcagctcccctgcagattatgggtaacccaggaagctttatgcaaaaccctatg
caaattcagcctcagatggcaattccaaacatcaactcaaatacccaattttcccctcag
cagcttttcgcgttccaaatgaaccagatgaataatgttaactctcaacaaccaaaaggt
caattcgtggcccaaaatattgttaatccacctcaattcttgaaccagaatgttgcaatg
caaaatttgaatcagcttctgcaattacaaatggctatgcaaatgccagggtttgctcag
gttgttcctgggaatgttccgctgtatccaaatcaggtgtctcagggtatgggacttcaa
aatcctaactttgctatgaatgggcatttgggtcttatgaatgccagtggaactgtccag
cagtccatgaatggaaatttgtctaagcaaatggctgatgcgactcggcaattgcaaggg
cagtcgccactgatgaactcttttggcgcggttcagcacccacaaactcagaacttcaat
attcctgcttctgctaattcgcagatttctcagggtatggtgcctcaaagttccaacttt
gttatgaatgcgcatatgggtcctgcgaatgccaatggagttgtccagcagtctaaaaat
ggttttcctaagcaaatgcctaacgcgactcagcaattgcaaggccaattgcctctgatg
aatccttttggctttgttcagcagccacaagctcagaacttcaatacacatgcttctgct
aatacacagggtatggggcctcaaatttccaactttgctatgaatgcacaattgggtctt
ttgaatgccaatggagctgtccagcagtctatgaatggttatgagcagatgcctaatgcg
actcagcaattgcttggtcagttgcctctgatgaatccttttggcgttgttcagcagcca
cgaactcagaacttcaatgctccttcttctgctaatgcacaggtaaaccctggatgtgtt
ggtgggcttaacaaatcaaaaggcaaccagcaaaattcttacaatagtaacttctcaaag
aatcaaaagcatggcgctaaatctatgaagtcccagtttggtaaagggaagttctcaact
cataataaaagcctagaaaaaggtcatcacagaaacggggagaaaaaaagtaatcttgct
aattcagtgaaacctgagatggagaaaaagaggtctctcttggtgacttattcggcgcaa
gaaatccgacggtggcgggaagaacgccgtaaaaattacccctcaaaatcaaaccttgag
aagaagattacagagaaaacggcagagtccgatgatagttcatgtgctgccaagttgcgc
cgtcagcaacttaaggaaattctagccaagcaggctgagttaggctgtgaagttgcagaa
ataccatcgtcctatctgtcggattctgagaaacaaggggatggaagggagcaaaaaagg
ccactgagtagaaaagagaggttccaaaaaaagttcaataaaagagaaagattcaatcga
aatgaccgcttctccaagaaacgaagatttggaaactctgattcatcaaatactcgtgat
caaaacggttctactgcaggtcaggttacagaaaccgcaagagaaccaacactactgcag
aaactattgagttcagatattcggagagataaacgccacctattgcaggtctttaggttt
atgaccatgaattctttctttaaagattggcctgagaaacccctgagatttccccaagtg
gtacttaaggaaacaggggaagaaattgaagctgctgaagaaatatatgatgctatagat
acaaccatcaaaaaatcatcaaatgacagtgacaatgatgatgaaaataatattgctgaa
tttactgaagcagctaatgagttacaagaaaatggtagtaactctgaaagtgaatga

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