Nicotiana tabacum (common tobacco): 107798106
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Entry
107798106 CDS
T04643
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107798106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107798106
03036 Chromosome and associated proteins [BR:
nta03036
]
107798106
Enzymes [BR:
nta01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107798106
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107798106
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
107798106
Noncanonical PRC1 (PRC1.1)
107798106
Noncanonical PRC1 (PRC1.3/1.5)
107798106
Noncanonical PRC1 (PRC1.6)
107798106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-rbx1
zf-RING_11
zf-RING_6
zf-RING_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
107798106
NCBI-ProteinID:
XP_016476548
UniProt:
A0A1S4AJF1
LinkDB
All DBs
Position
Un
AA seq
512 aa
AA seq
DB search
MPAQKRYLSNYQDDNNNNEDDDENSPQHQHRRRKHSRRVAGEQTRANMEEQQVDEQEEEE
DEQTQAQDNDDEDEDDQEEINQSSEDDSEGSGTDPEAFDELIAVSRSEIRTNDFDERSFF
AQLFQVRKDVECPICLGIIKRTRVVMGCQHRFCRECIDKSMRLGNNECPACRIHCASRRS
LRDDPGFDTLIEAIYPDVEKYEEEELVFLEEERALNEQIQASIAQISQRQSEALIKRRKV
GKDIAASSAQRTPRNYHNAYSRRRRNSQGAEPERSDPNESENDDHDRNKDSPPKDERGTQ
TKFRKRRRRKGALATPTSPSAASPDGGHIETAAELPRETVGNSTGPALKPETLTWGRGGV
RSHSRHGSASGSRNARNTRISKLVDYLESVRTNDGELNIHLELIPLDKQTTPSLKKPHLC
CRPSTSVEHLYEFVAQDIKSQVKDVELLAVKDNTTVNHSTLMDASNMLARVVSGSNVTLQ
SLERQETLEGINSSCPLNKNLILAYVQNNSEV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccagaaacgctatttgtcgaattatcaagatgacaataacaacaacgaagac
gatgatgagaactctccccagcatcagcaccgccggcggaaacattcacgacgtgttgcc
ggcgaacaaacacgagctaatatggaagagcaacaagtagatgagcaggaggaagaggaa
gatgagcaaactcaagcccaagataatgatgatgaggatgaggatgatcaagaggaaatt
aaccaatcctctgaagatgattctgagggaagtggcactgaccctgaagcctttgatgaa
ttgattgccgtgtcacgatctgagattcgcaccaatgatttcgacgagagaagttttttc
gcacaattatttcaagttcgtaaagatgtagaatgtccaatatgcttaggtattatcaag
agaactcgggttgtgatgggatgccaacaccgtttttgcagagaatgcatagataaatca
atgagactggggaataatgaatgccctgcttgccgcatacattgtgctagtcgacggtca
ctgagagatgaccctggatttgataccttaattgaggcaatatatccagacgttgagaag
tacgaagaggaggagcttgtctttcttgaagaggaacgggcactcaatgaacagattcaa
gcatccattgcccaaatttctcaacgccaatctgaagcactaattaagaggcgcaaagtt
ggtaaagacatagctgcttcctctgcacaaagaacacctcgcaactatcacaatgcttat
tcgagaagaagaagaaacagtcagggggctgaacctgagcgatctgatccaaatgagagt
gaaaatgatgatcatgacaggaataaagattcacctcccaaggatgagcgtggaacacaa
accaagttcaggaagcgccggaggcgcaaaggagctctggcaaccccgacttctccttca
gctgccagtccagacggtggacacattgaaactgcagcagaactacccagagaaaccgta
ggtaattctactggacctgcactgaagcctgaaacacttacttggggaagaggtggtgtc
cgaagtcacagtcgacatggcagtgcaagcggtagcagaaatgctcgtaacactcgaata
tcaaagttagttgattatcttgaaagtgtccgaacaaatgatggtgagttaaatatccat
cttgagcttattccattggacaaacaaacaacaccaagtctgaaaaagccccatctctgc
tgcaggccaagtacatcagttgaacacctctacgaatttgttgctcaggatataaaatca
caagtaaaagatgttgaattactggcagtaaaggacaataccactgttaaccattcaacc
ttaatggatgcatcaaatatgctagcccgagtggtcagtgggtccaatgttactctgcaa
agcttggaaaggcaagaaactttggaaggaattaattcaagttgcccattaaataagaat
ctgatccttgcttacgtgcaaaataattctgaggtatga
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integrated database retrieval system
